Experiment: MoLS4 with L-Tryptophan (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU1972 and DVU1973 overlap by 2 nucleotides DVU1973 and DVU1974 overlap by 8 nucleotides DVU1974 and DVU1975 are separated by 71 nucleotides
DVU1972: DVU1972 - hypothetical protein (TIGR), at 2,046,806 to 2,047,000
DVU1972
DVU1973: DVU1973 - rhodanese-like domain protein (TIGR), at 2,046,999 to 2,047,847
DVU1973
DVU1974: DVU1974 - pyridine nucleotide-disulfide oxidoreductase (TIGR), at 2,047,840 to 2,048,943
DVU1974
DVU1975: DVU1975 - methyl-accepting chemotaxis protein (TIGR), at 2,049,015 to 2,050,763
DVU1975
Position (kb)
2047
2048
2049 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2046.872 kb on + strand, within DVU1972 at 2046.880 kb on - strand, within DVU1972 at 2046.926 kb on + strand, within DVU1972 at 2046.985 kb on + strand at 2046.993 kb on - strand at 2047.154 kb on - strand, within DVU1973 at 2047.187 kb on - strand, within DVU1973 at 2047.214 kb on - strand, within DVU1973 at 2047.403 kb on - strand, within DVU1973 at 2047.429 kb on + strand, within DVU1973 at 2047.451 kb on - strand, within DVU1973 at 2047.460 kb on - strand, within DVU1973 at 2047.592 kb on - strand, within DVU1973 at 2047.619 kb on + strand, within DVU1973 at 2047.620 kb on - strand, within DVU1973 at 2047.663 kb on - strand, within DVU1973 at 2047.698 kb on + strand, within DVU1973 at 2047.707 kb on - strand, within DVU1973 at 2047.748 kb on - strand, within DVU1973 at 2047.891 kb on - strand at 2047.894 kb on + strand at 2047.945 kb on + strand at 2047.960 kb on - strand, within DVU1974 at 2047.995 kb on + strand, within DVU1974 at 2048.356 kb on + strand, within DVU1974 at 2048.395 kb on - strand, within DVU1974 at 2048.518 kb on + strand, within DVU1974 at 2048.615 kb on - strand, within DVU1974 at 2048.632 kb on + strand, within DVU1974 at 2048.642 kb on + strand, within DVU1974 at 2048.645 kb on - strand, within DVU1974 at 2048.647 kb on - strand, within DVU1974 at 2048.766 kb on + strand, within DVU1974 at 2048.774 kb on - strand, within DVU1974 at 2048.845 kb on + strand at 2048.903 kb on + strand at 2048.999 kb on - strand at 2049.021 kb on - strand at 2049.053 kb on - strand at 2049.072 kb on + strand at 2049.080 kb on - strand at 2049.105 kb on - strand at 2049.228 kb on - strand, within DVU1975 at 2049.323 kb on - strand, within DVU1975 at 2049.331 kb on + strand, within DVU1975 at 2049.465 kb on - strand, within DVU1975 at 2049.733 kb on - strand, within DVU1975 at 2049.842 kb on + strand, within DVU1975 at 2049.879 kb on - strand, within DVU1975
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with L-Tryptophan (N) remove 2,046,872 + DVU1972 0.34 +0.1 2,046,880 - DVU1972 0.38 -0.3 2,046,926 + DVU1972 0.62 -2.8 2,046,985 + -0.3 2,046,993 - -0.3 2,047,154 - DVU1973 0.18 +0.0 2,047,187 - DVU1973 0.22 -0.2 2,047,214 - DVU1973 0.25 -0.5 2,047,403 - DVU1973 0.48 -1.1 2,047,429 + DVU1973 0.51 -0.1 2,047,451 - DVU1973 0.53 -0.6 2,047,460 - DVU1973 0.54 -0.4 2,047,592 - DVU1973 0.70 +0.9 2,047,619 + DVU1973 0.73 -0.7 2,047,620 - DVU1973 0.73 -0.3 2,047,663 - DVU1973 0.78 -0.4 2,047,698 + DVU1973 0.82 -0.1 2,047,707 - DVU1973 0.83 -0.1 2,047,748 - DVU1973 0.88 -0.7 2,047,891 - -0.2 2,047,894 + -0.8 2,047,945 + -0.3 2,047,960 - DVU1974 0.11 -0.2 2,047,995 + DVU1974 0.14 -1.5 2,048,356 + DVU1974 0.47 +0.1 2,048,395 - DVU1974 0.50 -0.3 2,048,518 + DVU1974 0.61 -1.0 2,048,615 - DVU1974 0.70 -1.0 2,048,632 + DVU1974 0.72 +1.2 2,048,642 + DVU1974 0.73 -0.1 2,048,645 - DVU1974 0.73 -1.5 2,048,647 - DVU1974 0.73 -0.1 2,048,766 + DVU1974 0.84 -1.3 2,048,774 - DVU1974 0.85 -0.8 2,048,845 + -0.0 2,048,903 + -0.3 2,048,999 - -0.2 2,049,021 - -0.3 2,049,053 - -0.6 2,049,072 + +0.4 2,049,080 - -0.1 2,049,105 - -0.1 2,049,228 - DVU1975 0.12 +0.3 2,049,323 - DVU1975 0.18 -0.1 2,049,331 + DVU1975 0.18 -0.3 2,049,465 - DVU1975 0.26 +0.6 2,049,733 - DVU1975 0.41 +0.0 2,049,842 + DVU1975 0.47 -0.3 2,049,879 - DVU1975 0.49 +0.5
Or see this region's nucleotide sequence