Experiment: Paraquat dichloride 0.045 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_4211 and Ga0059261_4212 are separated by 34 nucleotides Ga0059261_4212 and Ga0059261_4213 overlap by 28 nucleotides
Ga0059261_4211: Ga0059261_4211 - Dehydrogenases (flavoproteins), at 4,364,697 to 4,366,358
_4211
Ga0059261_4212: Ga0059261_4212 - TPR repeat, at 4,366,393 to 4,367,955
_4212
Ga0059261_4213: Ga0059261_4213 - 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148), at 4,367,928 to 4,368,779
_4213
Position (kb)
4366
4367
4368 Strain fitness (log2 ratio)
-2
-1
0
1 at 4366.356 kb on + strand at 4366.357 kb on + strand at 4366.429 kb on + strand at 4366.540 kb on + strand at 4366.764 kb on + strand, within Ga0059261_4212 at 4366.809 kb on + strand, within Ga0059261_4212 at 4366.819 kb on + strand, within Ga0059261_4212 at 4366.819 kb on + strand, within Ga0059261_4212 at 4366.821 kb on + strand, within Ga0059261_4212 at 4366.821 kb on + strand, within Ga0059261_4212 at 4366.821 kb on + strand, within Ga0059261_4212 at 4366.821 kb on + strand, within Ga0059261_4212 at 4366.821 kb on + strand, within Ga0059261_4212 at 4366.821 kb on + strand, within Ga0059261_4212 at 4366.821 kb on + strand, within Ga0059261_4212 at 4366.821 kb on + strand, within Ga0059261_4212 at 4366.821 kb on + strand, within Ga0059261_4212 at 4366.962 kb on + strand, within Ga0059261_4212 at 4366.962 kb on + strand, within Ga0059261_4212 at 4367.218 kb on + strand, within Ga0059261_4212 at 4367.269 kb on + strand, within Ga0059261_4212 at 4367.269 kb on + strand, within Ga0059261_4212 at 4367.392 kb on + strand, within Ga0059261_4212 at 4367.599 kb on + strand, within Ga0059261_4212 at 4367.599 kb on + strand at 4367.608 kb on + strand, within Ga0059261_4212 at 4367.608 kb on + strand, within Ga0059261_4212 at 4367.608 kb on + strand, within Ga0059261_4212 at 4367.608 kb on + strand, within Ga0059261_4212 at 4367.719 kb on + strand, within Ga0059261_4212 at 4367.736 kb on + strand, within Ga0059261_4212 at 4367.821 kb on + strand at 4367.821 kb on + strand at 4367.821 kb on + strand at 4367.854 kb on + strand at 4367.854 kb on + strand at 4367.878 kb on + strand at 4368.812 kb on + strand at 4368.812 kb on + strand at 4368.813 kb on - strand at 4368.815 kb on - strand at 4368.865 kb on - strand at 4368.865 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.045 mg/ml remove 4,366,356 + -0.5 4,366,357 + +0.3 4,366,429 + +0.5 4,366,540 + +1.3 4,366,764 + Ga0059261_4212 0.24 -0.0 4,366,809 + Ga0059261_4212 0.27 -0.3 4,366,819 + Ga0059261_4212 0.27 +0.0 4,366,819 + Ga0059261_4212 0.27 +0.6 4,366,821 + Ga0059261_4212 0.27 -0.0 4,366,821 + Ga0059261_4212 0.27 -0.1 4,366,821 + Ga0059261_4212 0.27 +1.0 4,366,821 + Ga0059261_4212 0.27 +0.5 4,366,821 + Ga0059261_4212 0.27 +0.9 4,366,821 + Ga0059261_4212 0.27 +0.7 4,366,821 + Ga0059261_4212 0.27 +0.3 4,366,821 + Ga0059261_4212 0.27 -0.1 4,366,821 + Ga0059261_4212 0.27 +0.9 4,366,962 + Ga0059261_4212 0.36 +0.6 4,366,962 + Ga0059261_4212 0.36 -0.1 4,367,218 + Ga0059261_4212 0.53 -0.3 4,367,269 + Ga0059261_4212 0.56 +0.6 4,367,269 + Ga0059261_4212 0.56 +0.5 4,367,392 + Ga0059261_4212 0.64 +0.1 4,367,599 + Ga0059261_4212 0.77 -0.1 4,367,599 + -1.2 4,367,608 + Ga0059261_4212 0.78 +1.1 4,367,608 + Ga0059261_4212 0.78 +1.0 4,367,608 + Ga0059261_4212 0.78 +0.6 4,367,608 + Ga0059261_4212 0.78 +0.6 4,367,719 + Ga0059261_4212 0.85 +0.2 4,367,736 + Ga0059261_4212 0.86 +0.2 4,367,821 + +1.4 4,367,821 + -2.0 4,367,821 + -0.3 4,367,854 + -0.2 4,367,854 + -1.1 4,367,878 + +0.2 4,368,812 + +0.3 4,368,812 + -0.5 4,368,813 - -0.4 4,368,815 - +0.6 4,368,865 - +0.6 4,368,865 - -0.0
Or see this region's nucleotide sequence