Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3675

Experiment: Paraquat dichloride 0.045 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.045 mg/ml
3,786,365	+		Ga0059261_3674	0.33	+0.2
3,786,365	+		Ga0059261_3674	0.33	-0.4
3,786,365	+		Ga0059261_3674	0.33	-0.0
3,786,365	+		Ga0059261_3674	0.33	-0.0
3,786,365	+		Ga0059261_3674	0.33	+0.3
3,786,366	-		Ga0059261_3674	0.33	-0.0
3,786,366	-				+3.4
3,786,366	-		Ga0059261_3674	0.33	-0.8
3,786,366	-		Ga0059261_3674	0.33	-1.2
3,786,366	-		Ga0059261_3674	0.33	-0.0
3,786,425	+		Ga0059261_3674	0.38	+0.1
3,786,425	+		Ga0059261_3674	0.38	-2.3
3,786,425	+		Ga0059261_3674	0.38	-1.2
3,786,425	+				+0.1
3,786,425	+		Ga0059261_3674	0.38	+0.2
3,786,425	+		Ga0059261_3674	0.38	+0.0
3,786,425	+		Ga0059261_3674	0.38	-0.2
3,786,426	-		Ga0059261_3674	0.38	-1.0
3,786,426	-		Ga0059261_3674	0.38	+0.0
3,786,426	-		Ga0059261_3674	0.38	+1.0
3,786,426	-		Ga0059261_3674	0.38	-1.0
3,786,426	-		Ga0059261_3674	0.38	-0.4
3,786,584	+		Ga0059261_3674	0.50	+0.8
3,786,584	+		Ga0059261_3674	0.50	-0.9
3,786,585	-		Ga0059261_3674	0.50	-0.7
3,786,585	-		Ga0059261_3674	0.50	-0.8
3,786,585	-		Ga0059261_3674	0.50	+0.0
3,786,585	-		Ga0059261_3674	0.50	+1.1
3,786,585	-		Ga0059261_3674	0.50	+0.1
3,786,848	+		Ga0059261_3674	0.71	+0.6
3,786,848	+		Ga0059261_3674	0.71	-0.6
3,786,849	-		Ga0059261_3674	0.71	+0.9
3,786,849	-		Ga0059261_3674	0.71	-1.0
3,786,956	+		Ga0059261_3674	0.80	-0.6
3,786,956	+		Ga0059261_3674	0.80	+0.0
3,786,957	-		Ga0059261_3674	0.80	-0.8
3,787,043	+		Ga0059261_3674	0.87	+1.3
3,787,043	+		Ga0059261_3674	0.87	-0.6
3,787,043	+		Ga0059261_3674	0.87	-1.0
3,787,043	+		Ga0059261_3674	0.87	+0.2
3,787,043	+		Ga0059261_3674	0.87	-0.1
3,787,043	+		Ga0059261_3674	0.87	+0.7
3,787,044	-		Ga0059261_3674	0.87	-0.2
3,787,044	-		Ga0059261_3674	0.87	+0.1
3,787,044	-		Ga0059261_3674	0.87	-1.7
3,787,044	-		Ga0059261_3674	0.87	+0.1
3,787,044	-		Ga0059261_3674	0.87	+0.3
3,787,044	-		Ga0059261_3674	0.87	-0.2
3,787,044	-		Ga0059261_3674	0.87	-0.2
3,787,053	+		Ga0059261_3674	0.88	-0.1
3,787,124	+				-0.7
3,787,124	+				-0.1
3,787,124	+				+0.5
3,787,124	+				+0.6
3,787,124	+				+0.1
3,787,124	+				+0.1
3,787,124	+				-0.1
3,787,124	+				+1.8
3,787,124	+				-0.9
3,787,124	+				+1.1
3,787,125	-				+0.3
3,787,125	-				-0.4
3,787,125	-				-0.2
3,787,125	-				+0.3
3,787,125	-				-0.2
3,787,125	-				+0.2
3,787,125	-				-0.5
3,787,140	-				-0.2
3,787,140	-				+0.1
3,787,140	-				+0.4
3,787,140	-				-0.0
3,787,172	+				+0.8
3,787,172	+				-0.4
3,787,173	-				+0.4
3,787,202	+				-0.6
3,787,203	-				-0.2
3,787,203	-				-1.7
3,787,203	-				+0.2
3,787,203	-				+0.5
3,787,210	+				-0.1
3,787,211	-				+0.6
3,787,247	+				-0.9
3,787,247	+				+0.3
3,787,248	-				-0.1
3,787,248	-				+0.8
3,787,248	-				+0.1
3,787,248	-				-0.0
3,787,409	+		Ga0059261_3675	0.15	+0.6
3,787,409	+		Ga0059261_3675	0.15	+0.5
3,788,188	+		Ga0059261_3675	0.74	-0.3
3,788,189	-		Ga0059261_3675	0.74	+0.5
3,788,189	-		Ga0059261_3675	0.74	+0.0
3,788,269	+		Ga0059261_3675	0.80	+0.4
3,788,269	+		Ga0059261_3675	0.80	+0.8
3,788,270	-		Ga0059261_3675	0.80	-0.2
3,788,429	+				-0.4
3,788,626	+				-0.3
3,788,626	+				+0.0
3,788,839	+		Ga0059261_3676	0.24	-1.6
3,788,902	+		Ga0059261_3676	0.30	+2.7
3,788,902	+		Ga0059261_3676	0.30	+0.0
3,788,902	+				-0.6
3,788,920	+		Ga0059261_3676	0.32	+0.1
3,788,920	+		Ga0059261_3676	0.32	-0.6
3,788,920	+		Ga0059261_3676	0.32	+0.1
3,788,920	+		Ga0059261_3676	0.32	-1.6
3,788,920	+		Ga0059261_3676	0.32	+0.3
3,788,921	-		Ga0059261_3676	0.33	-0.9
3,788,921	-		Ga0059261_3676	0.33	+0.2
3,788,934	+		Ga0059261_3676	0.34	-0.6
3,788,935	-		Ga0059261_3676	0.34	+0.4
3,788,935	-		Ga0059261_3676	0.34	+0.4
3,788,935	-		Ga0059261_3676	0.34	-0.6
3,788,935	-		Ga0059261_3676	0.34	-0.3
3,788,935	-		Ga0059261_3676	0.34	-0.6
3,788,938	+		Ga0059261_3676	0.34	+0.3
3,788,938	+		Ga0059261_3676	0.34	-0.0
3,788,938	+		Ga0059261_3676	0.34	+0.4
3,788,939	-		Ga0059261_3676	0.35	-0.2
3,788,939	-		Ga0059261_3676	0.35	-0.4
3,788,939	-				+0.1
3,789,001	+		Ga0059261_3676	0.41	-0.4
3,789,001	+		Ga0059261_3676	0.41	+0.6
3,789,002	-		Ga0059261_3676	0.41	+0.2
3,789,002	-		Ga0059261_3676	0.41	-0.2
3,789,002	-		Ga0059261_3676	0.41	-0.0
3,789,016	+		Ga0059261_3676	0.43	+0.1
3,789,017	-		Ga0059261_3676	0.43	+0.1
3,789,017	-		Ga0059261_3676	0.43	+0.2
3,789,031	+		Ga0059261_3676	0.45	-0.6
3,789,032	-		Ga0059261_3676	0.45	+0.1
3,789,117	-		Ga0059261_3676	0.54	+0.2
3,789,117	-		Ga0059261_3676	0.54	-0.1
3,789,243	+		Ga0059261_3676	0.68	-0.1
3,789,244	-		Ga0059261_3676	0.68	+1.2
3,789,416	+		Ga0059261_3676	0.87	+0.5
3,789,514	+				-0.1
3,789,526	-				+0.1