Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3650

Experiment: Paraquat dichloride 0.045 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.045 mg/ml
3,764,445	+		Ga0059261_3648	0.32	+0.4
3,764,445	+		Ga0059261_3648	0.32	-0.2
3,764,446	-		Ga0059261_3648	0.32	+0.1
3,764,501	+		Ga0059261_3648	0.38	+0.5
3,764,501	+		Ga0059261_3648	0.38	-0.3
3,764,502	-		Ga0059261_3648	0.38	-0.0
3,764,502	-		Ga0059261_3648	0.38	-0.4
3,764,502	-		Ga0059261_3648	0.38	-0.3
3,764,519	+		Ga0059261_3648	0.40	+0.1
3,764,519	+		Ga0059261_3648	0.40	+1.2
3,764,520	-		Ga0059261_3648	0.40	+0.1
3,764,520	-		Ga0059261_3648	0.40	+0.1
3,764,520	-		Ga0059261_3648	0.40	+0.1
3,764,520	-		Ga0059261_3648	0.40	-0.9
3,764,520	-		Ga0059261_3648	0.40	+0.7
3,764,520	-		Ga0059261_3648	0.40	+0.5
3,764,564	+		Ga0059261_3648	0.45	+0.2
3,764,564	+		Ga0059261_3648	0.45	-0.1
3,764,564	+		Ga0059261_3648	0.45	-0.4
3,764,564	+		Ga0059261_3648	0.45	+0.6
3,764,564	+		Ga0059261_3648	0.45	+0.4
3,764,564	+		Ga0059261_3648	0.45	+0.4
3,764,565	-		Ga0059261_3648	0.45	+0.5
3,764,565	-		Ga0059261_3648	0.45	-0.7
3,764,565	-		Ga0059261_3648	0.45	+0.0
3,764,565	-		Ga0059261_3648	0.45	+0.2
3,764,589	-		Ga0059261_3648	0.48	+0.2
3,764,589	-		Ga0059261_3648	0.48	-0.1
3,764,627	+		Ga0059261_3648	0.52	+0.1
3,764,628	-		Ga0059261_3648	0.52	+0.7
3,764,628	-		Ga0059261_3648	0.52	-0.5
3,764,828	+		Ga0059261_3648	0.75	+0.7
3,764,828	+		Ga0059261_3648	0.75	-0.9
3,764,828	+		Ga0059261_3648	0.75	+0.5
3,764,829	-		Ga0059261_3648	0.75	+0.4
3,764,920	-				-0.9
3,764,988	-				+0.2
3,764,988	-				+0.5
3,765,075	+				+0.3
3,765,081	+				-0.9
3,765,081	+				+0.1
3,765,082	-				-0.2
3,765,082	-				+0.7
3,765,142	+				+0.4
3,765,142	+				+0.5
3,765,143	-				-0.3
3,765,143	-				+0.2
3,765,143	-				-0.9
3,765,255	+		Ga0059261_3649	0.28	-0.1
3,765,256	-		Ga0059261_3649	0.29	-0.5
3,765,256	-		Ga0059261_3649	0.29	-0.2
3,765,291	+		Ga0059261_3649	0.50	-0.1
3,765,291	+		Ga0059261_3649	0.50	-0.6
3,765,292	-		Ga0059261_3649	0.51	+0.0
3,765,292	-		Ga0059261_3649	0.51	+0.1
3,765,292	-		Ga0059261_3649	0.51	+0.1
3,765,295	+		Ga0059261_3649	0.53	+0.1
3,765,295	+		Ga0059261_3649	0.53	+0.0
3,765,295	+		Ga0059261_3649	0.53	+0.1
3,765,295	+		Ga0059261_3649	0.53	-2.2
3,765,295	+		Ga0059261_3649	0.53	+0.3
3,765,296	-		Ga0059261_3649	0.53	+0.4
3,765,296	-		Ga0059261_3649	0.53	+0.0
3,765,314	-		Ga0059261_3649	0.64	-0.3
3,765,314	-		Ga0059261_3649	0.64	-2.1
3,765,314	-		Ga0059261_3649	0.64	-0.7
3,765,461	+		Ga0059261_3650	0.17	+0.1
3,765,462	-		Ga0059261_3650	0.17	+0.5
3,765,462	-		Ga0059261_3650	0.17	+0.6
3,765,462	-		Ga0059261_3650	0.17	-0.0
3,765,462	-		Ga0059261_3650	0.17	+0.0
3,765,579	-		Ga0059261_3650	0.56	+0.5
3,765,785	+				-0.5
3,765,786	-				-0.4
3,765,832	-				+0.1
3,765,832	-				-0.1
3,765,849	+				-1.1
3,765,849	+				-0.1
3,765,850	-				-0.8
3,766,166	+		Ga0059261_3651	0.55	+1.4
3,766,166	+		Ga0059261_3651	0.55	+0.5
3,766,166	+		Ga0059261_3651	0.55	-0.2
3,766,166	+				+0.6
3,766,412	+				-1.2
3,766,412	+				+0.4
3,766,413	-				+0.0
3,766,413	-				+0.8
3,766,512	+				+0.7
3,766,513	-				+0.2
3,766,513	-				+0.1
3,766,513	-				+0.4
3,766,513	-				-0.0
3,766,513	-				+0.7
3,766,533	+				-1.6
3,766,533	+				-0.8
3,766,533	+				-0.3
3,766,639	+		Ga0059261_3652	0.23	-0.8
3,766,639	+		Ga0059261_3652	0.23	-1.0
3,766,639	+		Ga0059261_3652	0.23	+0.1
3,766,641	+		Ga0059261_3652	0.24	+0.5
3,766,641	+		Ga0059261_3652	0.24	+0.2
3,766,641	+		Ga0059261_3652	0.24	-0.2
3,766,641	+		Ga0059261_3652	0.24	-0.3
3,766,641	+		Ga0059261_3652	0.24	+0.4
3,766,641	+		Ga0059261_3652	0.24	-0.9
3,766,641	+		Ga0059261_3652	0.24	-0.7
3,766,641	+		Ga0059261_3652	0.24	-0.7
3,766,641	+				-0.2
3,766,641	+		Ga0059261_3652	0.24	+0.2
3,766,641	+		Ga0059261_3652	0.24	-1.7
3,766,641	+		Ga0059261_3652	0.24	+0.3
3,766,641	+		Ga0059261_3652	0.24	-1.5
3,766,641	+		Ga0059261_3652	0.24	-1.0
3,766,654	+		Ga0059261_3652	0.25	-1.1
3,766,654	+		Ga0059261_3652	0.25	+1.2
3,766,671	+		Ga0059261_3652	0.28	+0.0
3,766,671	+		Ga0059261_3652	0.28	-1.2
3,766,671	+		Ga0059261_3652	0.28	-0.7
3,766,671	+		Ga0059261_3652	0.28	-0.2
3,766,671	+		Ga0059261_3652	0.28	+2.1
3,766,671	+		Ga0059261_3652	0.28	+0.3