Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3642

Experiment: Paraquat dichloride 0.045 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.045 mg/ml
3,756,169	+		Ga0059261_3640	0.39	-0.3
3,756,267	+		Ga0059261_3640	0.52	-0.3
3,756,268	-		Ga0059261_3640	0.52	-0.1
3,756,303	+		Ga0059261_3640	0.57	+0.3
3,756,541	+		Ga0059261_3640	0.88	-0.6
3,756,541	+		Ga0059261_3640	0.88	-0.9
3,756,541	+		Ga0059261_3640	0.88	-0.3
3,756,541	+		Ga0059261_3640	0.88	+0.1
3,756,541	+		Ga0059261_3640	0.88	+0.4
3,756,542	-		Ga0059261_3640	0.88	+0.4
3,756,542	-		Ga0059261_3640	0.88	+0.9
3,756,678	+				-0.6
3,756,678	+				+0.4
3,756,678	+				-0.8
3,756,679	-				-1.0
3,756,679	-				-0.0
3,756,679	-				+0.4
3,756,679	-				+0.5
3,756,679	-				-0.2
3,756,679	-				-0.2
3,756,802	+		Ga0059261_3641	0.27	+0.4
3,756,802	+		Ga0059261_3641	0.27	+0.2
3,756,802	+				+1.4
3,756,803	-		Ga0059261_3641	0.27	-0.4
3,756,803	-		Ga0059261_3641	0.27	-0.5
3,756,803	-		Ga0059261_3641	0.27	-1.4
3,756,989	-		Ga0059261_3641	0.65	-0.5
3,756,989	-		Ga0059261_3641	0.65	-0.7
3,756,992	+		Ga0059261_3641	0.66	-0.1
3,757,268	-				+0.3
3,757,269	+				-0.4
3,757,269	+				+0.4
3,757,269	+				+0.4
3,757,270	-				-0.3
3,757,270	-				-0.3
3,757,270	-				+0.2
3,757,270	-				+0.7
3,757,270	-				-0.1
3,757,270	-				+0.2
3,757,270	-				+0.1
3,757,270	-				+0.4
3,757,314	-		Ga0059261_3642	0.11	-0.5
3,757,314	-		Ga0059261_3642	0.11	-0.3
3,757,366	+		Ga0059261_3642	0.15	+0.3
3,757,366	+		Ga0059261_3642	0.15	-0.2
3,757,366	+		Ga0059261_3642	0.15	+0.7
3,757,366	+		Ga0059261_3642	0.15	-0.2
3,757,366	+		Ga0059261_3642	0.15	-0.2
3,757,366	+		Ga0059261_3642	0.15	-0.8
3,757,366	+		Ga0059261_3642	0.15	-0.5
3,757,366	+		Ga0059261_3642	0.15	+0.4
3,757,366	+		Ga0059261_3642	0.15	-0.2
3,757,367	-		Ga0059261_3642	0.15	-1.0
3,757,367	-		Ga0059261_3642	0.15	-0.3
3,757,367	-		Ga0059261_3642	0.15	-0.2
3,757,367	-		Ga0059261_3642	0.15	+0.1
3,757,367	-		Ga0059261_3642	0.15	-0.2
3,757,367	-		Ga0059261_3642	0.15	-0.2
3,757,367	-		Ga0059261_3642	0.15	+0.1
3,757,367	-		Ga0059261_3642	0.15	-0.2
3,757,367	-		Ga0059261_3642	0.15	+0.3
3,757,367	-		Ga0059261_3642	0.15	+0.0
3,757,367	-		Ga0059261_3642	0.15	-0.1
3,757,368	+		Ga0059261_3642	0.15	-0.1
3,757,368	+		Ga0059261_3642	0.15	+0.1
3,757,368	+		Ga0059261_3642	0.15	-0.1
3,757,368	+		Ga0059261_3642	0.15	-0.2
3,757,369	-		Ga0059261_3642	0.15	+0.0
3,757,369	-		Ga0059261_3642	0.15	-1.1
3,757,369	-		Ga0059261_3642	0.15	+0.4
3,757,369	-		Ga0059261_3642	0.15	-0.2
3,757,369	-		Ga0059261_3642	0.15	-0.4
3,757,369	-		Ga0059261_3642	0.15	+2.0
3,757,369	-		Ga0059261_3642	0.15	-0.5
3,757,369	-		Ga0059261_3642	0.15	-0.4
3,757,710	+		Ga0059261_3642	0.38	+0.1
3,757,752	+		Ga0059261_3642	0.41	-0.0
3,757,752	+		Ga0059261_3642	0.41	-0.6
3,757,752	+		Ga0059261_3642	0.41	+0.4
3,757,753	-		Ga0059261_3642	0.41	-0.6
3,757,753	-		Ga0059261_3642	0.41	-0.0
3,757,753	-		Ga0059261_3642	0.41	-0.7
3,757,753	-		Ga0059261_3642	0.41	-0.8
3,757,753	-		Ga0059261_3642	0.41	-0.8
3,757,780	+		Ga0059261_3642	0.43	-0.3
3,757,930	+		Ga0059261_3642	0.53	-0.5
3,757,931	+		Ga0059261_3642	0.53	-0.2
3,757,931	-		Ga0059261_3642	0.53	-0.7
3,758,312	+		Ga0059261_3642	0.79	-0.4
3,758,313	-		Ga0059261_3642	0.79	+0.4
3,758,375	-		Ga0059261_3642	0.83	-0.1
3,758,375	-		Ga0059261_3642	0.83	+0.1
3,758,375	-		Ga0059261_3642	0.83	-1.1
3,758,389	-		Ga0059261_3642	0.84	-0.4
3,758,664	+				-0.2
3,758,664	+				+0.1
3,758,664	+				-0.5
3,758,863	+		Ga0059261_3643	0.18	+0.6
3,758,863	+		Ga0059261_3643	0.18	-0.4
3,758,864	-		Ga0059261_3643	0.18	-0.4
3,758,864	-		Ga0059261_3643	0.18	+0.3
3,759,208	+		Ga0059261_3643	0.44	+0.4
3,759,208	+		Ga0059261_3643	0.44	+0.0
3,759,208	+		Ga0059261_3643	0.44	-0.1
3,759,208	+		Ga0059261_3643	0.44	-0.1
3,759,208	+		Ga0059261_3643	0.44	+0.3
3,759,209	-		Ga0059261_3643	0.44	+0.4
3,759,209	-		Ga0059261_3643	0.44	-0.8
3,759,209	-		Ga0059261_3643	0.44	-0.6
3,759,209	-		Ga0059261_3643	0.44	+0.2
3,759,269	+		Ga0059261_3643	0.49	-0.0
3,759,269	+		Ga0059261_3643	0.49	-0.1
3,759,269	+		Ga0059261_3643	0.49	-0.8
3,759,269	+		Ga0059261_3643	0.49	+0.0
3,759,269	+		Ga0059261_3643	0.49	-1.4
3,759,270	-		Ga0059261_3643	0.49	-0.1
3,759,270	-		Ga0059261_3643	0.49	-0.0
3,759,270	-		Ga0059261_3643	0.49	+0.1
3,759,296	+				+0.8
3,759,307	+		Ga0059261_3643	0.51	-1.0
3,759,307	+		Ga0059261_3643	0.51	+0.0
3,759,307	+		Ga0059261_3643	0.51	-0.2
3,759,307	+		Ga0059261_3643	0.51	+0.7
3,759,308	-		Ga0059261_3643	0.51	+0.2
3,759,308	-		Ga0059261_3643	0.51	+0.1
3,759,308	-		Ga0059261_3643	0.51	+0.4
3,759,331	+		Ga0059261_3643	0.53	-0.1
3,759,332	-				+0.4
3,759,356	+		Ga0059261_3643	0.55	+0.2
3,759,357	-		Ga0059261_3643	0.55	-0.4
3,759,359	-		Ga0059261_3643	0.55	+0.2
3,759,365	-		Ga0059261_3643	0.56	+0.3
3,759,365	-		Ga0059261_3643	0.56	-0.3
3,759,471	-		Ga0059261_3643	0.64	-0.1
3,759,593	-		Ga0059261_3643	0.73	-1.4