Experiment: Paraquat dichloride 0.045 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_1910 and Ga0059261_1911 are separated by 143 nucleotides Ga0059261_1911 and Ga0059261_1912 overlap by 1 nucleotides Ga0059261_1912 and Ga0059261_1913 overlap by 8 nucleotides Ga0059261_1913 and Ga0059261_1914 overlap by 4 nucleotides
Ga0059261_1910: Ga0059261_1910 - translation initiation factor IF-1, at 2,022,029 to 2,022,247
_1910
Ga0059261_1911: Ga0059261_1911 - Thioredoxin-like proteins and domains, at 2,022,391 to 2,022,972
_1911
Ga0059261_1912: Ga0059261_1912 - Nitroreductase, at 2,022,972 to 2,023,565
_1912
Ga0059261_1913: Ga0059261_1913 - tRNA threonylcarbamoyl adenosine modification protein YeaZ, at 2,023,558 to 2,024,202
_1913
Ga0059261_1914: Ga0059261_1914 - Acetyltransferases, at 2,024,199 to 2,024,675
_1914
Position (kb)
2022
2023
2024 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2021.980 kb on + strand at 2021.981 kb on - strand at 2021.981 kb on - strand at 2022.853 kb on + strand, within Ga0059261_1911 at 2022.854 kb on - strand, within Ga0059261_1911 at 2022.854 kb on - strand, within Ga0059261_1911 at 2022.854 kb on - strand, within Ga0059261_1911 at 2022.854 kb on - strand, within Ga0059261_1911 at 2022.934 kb on + strand at 2022.934 kb on + strand at 2022.934 kb on + strand at 2023.029 kb on + strand at 2023.029 kb on + strand at 2023.029 kb on + strand at 2023.029 kb on + strand at 2023.029 kb on + strand at 2023.029 kb on + strand at 2023.029 kb on + strand at 2023.031 kb on + strand at 2023.038 kb on + strand, within Ga0059261_1912 at 2023.038 kb on + strand, within Ga0059261_1912 at 2023.080 kb on + strand at 2023.080 kb on + strand, within Ga0059261_1912 at 2023.080 kb on + strand, within Ga0059261_1912 at 2023.362 kb on + strand, within Ga0059261_1912 at 2023.362 kb on + strand, within Ga0059261_1912 at 2024.149 kb on + strand at 2024.149 kb on + strand at 2024.149 kb on + strand at 2024.149 kb on + strand at 2024.149 kb on + strand at 2024.149 kb on + strand at 2024.150 kb on - strand at 2024.150 kb on - strand at 2024.150 kb on - strand at 2024.150 kb on - strand at 2024.150 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.045 mg/ml remove 2,021,980 + -0.1 2,021,981 - -0.2 2,021,981 - +0.1 2,022,853 + Ga0059261_1911 0.79 -2.1 2,022,854 - Ga0059261_1911 0.80 -1.2 2,022,854 - Ga0059261_1911 0.80 -2.5 2,022,854 - Ga0059261_1911 0.80 -3.1 2,022,854 - Ga0059261_1911 0.80 -1.0 2,022,934 + -0.6 2,022,934 + -1.8 2,022,934 + -0.8 2,023,029 + +0.4 2,023,029 + +0.2 2,023,029 + -0.4 2,023,029 + +1.6 2,023,029 + -0.5 2,023,029 + -0.1 2,023,029 + +1.2 2,023,031 + +0.6 2,023,038 + Ga0059261_1912 0.11 +0.4 2,023,038 + Ga0059261_1912 0.11 +0.3 2,023,080 + +1.0 2,023,080 + Ga0059261_1912 0.18 -0.1 2,023,080 + Ga0059261_1912 0.18 +0.4 2,023,362 + Ga0059261_1912 0.66 +1.2 2,023,362 + Ga0059261_1912 0.66 -0.2 2,024,149 + -0.0 2,024,149 + +0.4 2,024,149 + +1.0 2,024,149 + +0.1 2,024,149 + +0.2 2,024,149 + -0.9 2,024,150 - +0.5 2,024,150 - -0.7 2,024,150 - +0.4 2,024,150 - +0.7 2,024,150 - -0.1
Or see this region's nucleotide sequence