Experiment: Paraquat dichloride 0.045 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_0470 and Ga0059261_0471 overlap by 4 nucleotides Ga0059261_0471 and Ga0059261_0472 are separated by 19 nucleotides Ga0059261_0472 and Ga0059261_0473 are separated by 150 nucleotides Ga0059261_0473 and Ga0059261_0474 overlap by 4 nucleotides
Ga0059261_0470: Ga0059261_0470 - copper-resistance protein, CopA family, at 457,901 to 459,649
_0470
Ga0059261_0471: Ga0059261_0471 - Uncharacterized protein involved in copper resistance, at 459,646 to 460,626
_0471
Ga0059261_0472: Ga0059261_0472 - Predicted metal-binding protein, at 460,646 to 461,098
_0472
Ga0059261_0473: Ga0059261_0473 - Predicted Fe-S protein, at 461,249 to 461,427
_0473
Ga0059261_0474: Ga0059261_0474 - cation diffusion facilitator family transporter, at 461,424 to 462,368
_0474
Position (kb) 460
461
462 Strain fitness (log2 ratio) -1
0
1
2 at 459.652 kb on + strand at 459.652 kb on + strand at 459.652 kb on + strand at 459.652 kb on + strand at 459.652 kb on + strand at 459.652 kb on + strand at 459.652 kb on + strand at 459.653 kb on - strand at 459.653 kb on - strand at 459.653 kb on - strand at 459.718 kb on - strand at 459.718 kb on - strand at 459.937 kb on + strand, within Ga0059261_0471 at 459.937 kb on + strand, within Ga0059261_0471 at 459.937 kb on + strand, within Ga0059261_0471 at 459.937 kb on - strand, within Ga0059261_0471 at 459.938 kb on - strand, within Ga0059261_0471 at 459.938 kb on - strand, within Ga0059261_0471 at 459.938 kb on - strand, within Ga0059261_0471 at 459.938 kb on - strand, within Ga0059261_0471 at 459.938 kb on - strand, within Ga0059261_0471 at 460.057 kb on + strand, within Ga0059261_0471 at 460.057 kb on + strand, within Ga0059261_0471 at 460.057 kb on + strand, within Ga0059261_0471 at 460.057 kb on + strand, within Ga0059261_0471 at 460.057 kb on + strand, within Ga0059261_0471 at 460.057 kb on + strand, within Ga0059261_0471 at 460.057 kb on + strand, within Ga0059261_0471 at 460.057 kb on + strand, within Ga0059261_0471 at 460.057 kb on + strand, within Ga0059261_0471 at 460.057 kb on + strand, within Ga0059261_0471 at 460.057 kb on + strand, within Ga0059261_0471 at 460.057 kb on + strand, within Ga0059261_0471 at 460.058 kb on - strand, within Ga0059261_0471 at 460.058 kb on - strand, within Ga0059261_0471 at 460.058 kb on - strand, within Ga0059261_0471 at 460.058 kb on - strand, within Ga0059261_0471 at 460.058 kb on - strand, within Ga0059261_0471 at 460.058 kb on - strand at 460.059 kb on + strand, within Ga0059261_0471 at 460.059 kb on + strand, within Ga0059261_0471 at 460.059 kb on + strand, within Ga0059261_0471 at 460.059 kb on + strand, within Ga0059261_0471 at 460.059 kb on + strand, within Ga0059261_0471 at 460.059 kb on + strand, within Ga0059261_0471 at 460.059 kb on + strand, within Ga0059261_0471 at 460.059 kb on + strand, within Ga0059261_0471 at 460.060 kb on - strand, within Ga0059261_0471 at 460.060 kb on - strand, within Ga0059261_0471 at 460.060 kb on - strand, within Ga0059261_0471 at 460.060 kb on - strand at 460.081 kb on + strand, within Ga0059261_0471 at 460.081 kb on + strand, within Ga0059261_0471 at 460.082 kb on - strand, within Ga0059261_0471 at 460.174 kb on + strand, within Ga0059261_0471 at 460.174 kb on + strand at 460.175 kb on - strand, within Ga0059261_0471 at 460.175 kb on - strand, within Ga0059261_0471 at 460.217 kb on + strand, within Ga0059261_0471 at 460.217 kb on + strand, within Ga0059261_0471 at 460.218 kb on - strand, within Ga0059261_0471 at 460.218 kb on - strand, within Ga0059261_0471 at 460.252 kb on + strand, within Ga0059261_0471 at 460.252 kb on + strand at 460.253 kb on - strand, within Ga0059261_0471 at 460.253 kb on - strand, within Ga0059261_0471 at 460.253 kb on - strand, within Ga0059261_0471 at 460.253 kb on - strand, within Ga0059261_0471 at 460.285 kb on + strand, within Ga0059261_0471 at 460.285 kb on + strand, within Ga0059261_0471 at 460.357 kb on + strand, within Ga0059261_0471 at 460.357 kb on + strand, within Ga0059261_0471 at 460.357 kb on + strand, within Ga0059261_0471 at 460.358 kb on - strand, within Ga0059261_0471 at 460.358 kb on - strand, within Ga0059261_0471 at 460.358 kb on - strand, within Ga0059261_0471 at 460.358 kb on - strand, within Ga0059261_0471 at 460.513 kb on + strand, within Ga0059261_0471 at 460.513 kb on + strand, within Ga0059261_0471 at 460.513 kb on + strand, within Ga0059261_0471 at 460.513 kb on + strand, within Ga0059261_0471 at 460.514 kb on - strand, within Ga0059261_0471 at 460.514 kb on - strand, within Ga0059261_0471 at 460.514 kb on - strand, within Ga0059261_0471 at 460.514 kb on - strand, within Ga0059261_0471 at 460.514 kb on - strand, within Ga0059261_0471 at 460.514 kb on - strand, within Ga0059261_0471 at 460.514 kb on - strand, within Ga0059261_0471 at 460.515 kb on + strand, within Ga0059261_0471 at 460.515 kb on + strand, within Ga0059261_0471 at 460.515 kb on + strand, within Ga0059261_0471 at 460.528 kb on + strand, within Ga0059261_0471 at 460.528 kb on + strand, within Ga0059261_0471 at 460.529 kb on - strand at 460.529 kb on - strand at 460.529 kb on - strand at 460.641 kb on + strand at 460.641 kb on + strand at 460.641 kb on + strand at 460.642 kb on - strand at 460.738 kb on - strand, within Ga0059261_0472 at 460.738 kb on - strand, within Ga0059261_0472 at 460.738 kb on - strand, within Ga0059261_0472 at 461.023 kb on - strand, within Ga0059261_0472 at 461.023 kb on - strand, within Ga0059261_0472 at 461.045 kb on + strand, within Ga0059261_0472 at 461.045 kb on + strand, within Ga0059261_0472 at 461.096 kb on + strand at 461.096 kb on + strand at 461.096 kb on + strand at 461.097 kb on - strand at 461.097 kb on - strand at 461.149 kb on + strand at 461.149 kb on + strand at 461.149 kb on + strand at 461.150 kb on - strand at 461.150 kb on - strand at 461.150 kb on - strand at 461.165 kb on + strand at 461.165 kb on + strand at 461.166 kb on - strand at 461.166 kb on - strand at 461.191 kb on + strand at 461.191 kb on + strand at 461.193 kb on + strand at 461.193 kb on + strand at 461.193 kb on + strand at 461.193 kb on + strand at 461.193 kb on + strand at 461.193 kb on + strand at 461.194 kb on - strand at 461.194 kb on - strand at 461.194 kb on - strand at 461.194 kb on - strand at 461.194 kb on - strand at 461.194 kb on - strand at 461.194 kb on - strand at 461.219 kb on + strand at 461.220 kb on - strand at 461.234 kb on + strand at 461.234 kb on + strand at 461.237 kb on + strand at 461.237 kb on + strand at 461.237 kb on + strand at 461.238 kb on - strand at 461.251 kb on - strand at 461.303 kb on + strand, within Ga0059261_0473 at 461.303 kb on + strand, within Ga0059261_0473 at 461.303 kb on + strand, within Ga0059261_0473 at 461.303 kb on + strand, within Ga0059261_0473 at 461.304 kb on - strand, within Ga0059261_0473 at 461.304 kb on - strand, within Ga0059261_0473 at 461.359 kb on - strand, within Ga0059261_0473 at 461.440 kb on + strand at 461.441 kb on + strand at 461.441 kb on + strand at 461.441 kb on + strand at 461.441 kb on + strand at 461.441 kb on + strand at 461.442 kb on - strand at 461.442 kb on - strand at 461.442 kb on - strand at 461.442 kb on - strand at 461.442 kb on - strand at 461.442 kb on - strand at 461.442 kb on - strand at 461.442 kb on - strand at 461.520 kb on + strand, within Ga0059261_0474 at 461.520 kb on + strand, within Ga0059261_0474 at 461.520 kb on + strand, within Ga0059261_0474 at 461.520 kb on + strand, within Ga0059261_0474 at 461.520 kb on + strand, within Ga0059261_0474 at 461.521 kb on - strand, within Ga0059261_0474 at 461.521 kb on - strand, within Ga0059261_0474 at 461.521 kb on - strand, within Ga0059261_0474 at 461.521 kb on - strand, within Ga0059261_0474 at 461.521 kb on - strand, within Ga0059261_0474 at 461.521 kb on - strand, within Ga0059261_0474 at 461.521 kb on - strand, within Ga0059261_0474 at 461.521 kb on - strand, within Ga0059261_0474 at 461.521 kb on - strand, within Ga0059261_0474 at 461.658 kb on - strand, within Ga0059261_0474 at 461.709 kb on - strand, within Ga0059261_0474 at 461.744 kb on - strand, within Ga0059261_0474 at 461.744 kb on - strand, within Ga0059261_0474 at 461.744 kb on - strand, within Ga0059261_0474 at 461.768 kb on + strand, within Ga0059261_0474 at 461.810 kb on - strand, within Ga0059261_0474 at 461.810 kb on - strand, within Ga0059261_0474 at 461.825 kb on + strand, within Ga0059261_0474 at 461.825 kb on + strand, within Ga0059261_0474 at 461.826 kb on - strand, within Ga0059261_0474 at 461.826 kb on - strand, within Ga0059261_0474 at 461.828 kb on + strand, within Ga0059261_0474 at 461.828 kb on + strand, within Ga0059261_0474 at 461.828 kb on + strand, within Ga0059261_0474 at 461.828 kb on + strand, within Ga0059261_0474 at 461.829 kb on - strand, within Ga0059261_0474 at 461.829 kb on - strand, within Ga0059261_0474 at 461.829 kb on - strand, within Ga0059261_0474 at 461.940 kb on - strand, within Ga0059261_0474 at 462.004 kb on + strand, within Ga0059261_0474 at 462.005 kb on - strand, within Ga0059261_0474 at 462.036 kb on + strand, within Ga0059261_0474
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.045 mg/ml remove 459,652 + +0.6 459,652 + +0.4 459,652 + +0.2 459,652 + -0.6 459,652 + -1.4 459,652 + +0.4 459,652 + +0.9 459,653 - +0.4 459,653 - -0.2 459,653 - -0.5 459,718 - +2.4 459,718 - +0.8 459,937 + Ga0059261_0471 0.30 -0.2 459,937 + Ga0059261_0471 0.30 -0.2 459,937 + Ga0059261_0471 0.30 +0.6 459,937 - Ga0059261_0471 0.30 +0.4 459,938 - Ga0059261_0471 0.30 +0.5 459,938 - Ga0059261_0471 0.30 -0.3 459,938 - Ga0059261_0471 0.30 +0.1 459,938 - Ga0059261_0471 0.30 +1.0 459,938 - Ga0059261_0471 0.30 +0.4 460,057 + Ga0059261_0471 0.42 +0.4 460,057 + Ga0059261_0471 0.42 +0.3 460,057 + Ga0059261_0471 0.42 -0.1 460,057 + Ga0059261_0471 0.42 -0.4 460,057 + Ga0059261_0471 0.42 +0.6 460,057 + Ga0059261_0471 0.42 -0.3 460,057 + Ga0059261_0471 0.42 -1.3 460,057 + Ga0059261_0471 0.42 -0.1 460,057 + Ga0059261_0471 0.42 -0.3 460,057 + Ga0059261_0471 0.42 -0.9 460,057 + Ga0059261_0471 0.42 -0.1 460,057 + Ga0059261_0471 0.42 -0.7 460,058 - Ga0059261_0471 0.42 +0.4 460,058 - Ga0059261_0471 0.42 -0.5 460,058 - Ga0059261_0471 0.42 +0.2 460,058 - Ga0059261_0471 0.42 -0.2 460,058 - Ga0059261_0471 0.42 +0.1 460,058 - +0.0 460,059 + Ga0059261_0471 0.42 -0.6 460,059 + Ga0059261_0471 0.42 -0.0 460,059 + Ga0059261_0471 0.42 +0.2 460,059 + Ga0059261_0471 0.42 -0.5 460,059 + Ga0059261_0471 0.42 -0.6 460,059 + Ga0059261_0471 0.42 -0.0 460,059 + Ga0059261_0471 0.42 -0.6 460,059 + Ga0059261_0471 0.42 -0.4 460,060 - Ga0059261_0471 0.42 +0.5 460,060 - Ga0059261_0471 0.42 +0.5 460,060 - Ga0059261_0471 0.42 -0.3 460,060 - -0.2 460,081 + Ga0059261_0471 0.44 +0.2 460,081 + Ga0059261_0471 0.44 +0.4 460,082 - Ga0059261_0471 0.44 -0.2 460,174 + Ga0059261_0471 0.54 +0.0 460,174 + +0.4 460,175 - Ga0059261_0471 0.54 -0.3 460,175 - Ga0059261_0471 0.54 -0.2 460,217 + Ga0059261_0471 0.58 +0.3 460,217 + Ga0059261_0471 0.58 -0.0 460,218 - Ga0059261_0471 0.58 +0.3 460,218 - Ga0059261_0471 0.58 -0.1 460,252 + Ga0059261_0471 0.62 +0.1 460,252 + +0.8 460,253 - Ga0059261_0471 0.62 -0.9 460,253 - Ga0059261_0471 0.62 +0.4 460,253 - Ga0059261_0471 0.62 -0.2 460,253 - Ga0059261_0471 0.62 -0.2 460,285 + Ga0059261_0471 0.65 -0.6 460,285 + Ga0059261_0471 0.65 +1.4 460,357 + Ga0059261_0471 0.72 -0.0 460,357 + Ga0059261_0471 0.72 +0.8 460,357 + Ga0059261_0471 0.72 +0.3 460,358 - Ga0059261_0471 0.73 -1.5 460,358 - Ga0059261_0471 0.73 +1.4 460,358 - Ga0059261_0471 0.73 +1.4 460,358 - Ga0059261_0471 0.73 -1.0 460,513 + Ga0059261_0471 0.88 -0.2 460,513 + Ga0059261_0471 0.88 -0.6 460,513 + Ga0059261_0471 0.88 +0.4 460,513 + Ga0059261_0471 0.88 -0.0 460,514 - Ga0059261_0471 0.88 +0.2 460,514 - Ga0059261_0471 0.88 +0.4 460,514 - Ga0059261_0471 0.88 +0.6 460,514 - Ga0059261_0471 0.88 +1.4 460,514 - Ga0059261_0471 0.88 -0.0 460,514 - Ga0059261_0471 0.88 +0.5 460,514 - Ga0059261_0471 0.88 -0.4 460,515 + Ga0059261_0471 0.89 -0.4 460,515 + Ga0059261_0471 0.89 -0.0 460,515 + Ga0059261_0471 0.89 +1.4 460,528 + Ga0059261_0471 0.90 -0.8 460,528 + Ga0059261_0471 0.90 -0.0 460,529 - -1.4 460,529 - -0.2 460,529 - +0.6 460,641 + -0.2 460,641 + -0.4 460,641 + -0.7 460,642 - +0.5 460,738 - Ga0059261_0472 0.20 +0.5 460,738 - Ga0059261_0472 0.20 +0.1 460,738 - Ga0059261_0472 0.20 +0.0 461,023 - Ga0059261_0472 0.83 -0.2 461,023 - Ga0059261_0472 0.83 +0.1 461,045 + Ga0059261_0472 0.88 +0.4 461,045 + Ga0059261_0472 0.88 +0.5 461,096 + -0.6 461,096 + +0.2 461,096 + +0.1 461,097 - -0.1 461,097 - +0.4 461,149 + -0.0 461,149 + -0.5 461,149 + -0.3 461,150 - +1.4 461,150 - -0.3 461,150 - +0.0 461,165 + -0.5 461,165 + +0.2 461,166 - +0.4 461,166 - -0.6 461,191 + +0.2 461,191 + +0.4 461,193 + -0.4 461,193 + +1.4 461,193 + -0.1 461,193 + +0.0 461,193 + +0.7 461,193 + +0.4 461,194 - -0.2 461,194 - -0.0 461,194 - -0.1 461,194 - -0.7 461,194 - -0.1 461,194 - -0.7 461,194 - -0.3 461,219 + +0.4 461,220 - +0.1 461,234 + +0.1 461,234 + +1.0 461,237 + -1.1 461,237 + -0.4 461,237 + -0.6 461,238 - -0.2 461,251 - +0.5 461,303 + Ga0059261_0473 0.30 -1.0 461,303 + Ga0059261_0473 0.30 -0.8 461,303 + Ga0059261_0473 0.30 -0.2 461,303 + Ga0059261_0473 0.30 -0.3 461,304 - Ga0059261_0473 0.31 +0.5 461,304 - Ga0059261_0473 0.31 -0.2 461,359 - Ga0059261_0473 0.61 +0.3 461,440 + +0.1 461,441 + -0.1 461,441 + +0.2 461,441 + +0.3 461,441 + +0.0 461,441 + -0.2 461,442 - -0.1 461,442 - -0.4 461,442 - +0.2 461,442 - -0.4 461,442 - -0.6 461,442 - +0.1 461,442 - -0.0 461,442 - +0.1 461,520 + Ga0059261_0474 0.10 +0.5 461,520 + Ga0059261_0474 0.10 +0.7 461,520 + Ga0059261_0474 0.10 +1.4 461,520 + Ga0059261_0474 0.10 -0.2 461,520 + Ga0059261_0474 0.10 -0.6 461,521 - Ga0059261_0474 0.10 +0.4 461,521 - Ga0059261_0474 0.10 -0.1 461,521 - Ga0059261_0474 0.10 +0.0 461,521 - Ga0059261_0474 0.10 +0.9 461,521 - Ga0059261_0474 0.10 +0.0 461,521 - Ga0059261_0474 0.10 -0.1 461,521 - Ga0059261_0474 0.10 -0.4 461,521 - Ga0059261_0474 0.10 -0.1 461,521 - Ga0059261_0474 0.10 -0.4 461,658 - Ga0059261_0474 0.25 -0.0 461,709 - Ga0059261_0474 0.30 -0.2 461,744 - Ga0059261_0474 0.34 -0.1 461,744 - Ga0059261_0474 0.34 +0.4 461,744 - Ga0059261_0474 0.34 -0.6 461,768 + Ga0059261_0474 0.36 -0.3 461,810 - Ga0059261_0474 0.41 -0.6 461,810 - Ga0059261_0474 0.41 -0.0 461,825 + Ga0059261_0474 0.42 -0.7 461,825 + Ga0059261_0474 0.42 -0.5 461,826 - Ga0059261_0474 0.43 -0.2 461,826 - Ga0059261_0474 0.43 -0.0 461,828 + Ga0059261_0474 0.43 -0.9 461,828 + Ga0059261_0474 0.43 -0.6 461,828 + Ga0059261_0474 0.43 -1.1 461,828 + Ga0059261_0474 0.43 -0.0 461,829 - Ga0059261_0474 0.43 -1.0 461,829 - Ga0059261_0474 0.43 +0.8 461,829 - Ga0059261_0474 0.43 +0.2 461,940 - Ga0059261_0474 0.55 -1.2 462,004 + Ga0059261_0474 0.61 -0.4 462,005 - Ga0059261_0474 0.61 -0.2 462,036 + Ga0059261_0474 0.65 -0.5
Or see this region's nucleotide sequence