Strain Fitness in Shewanella loihica PV-4 around Shew_3579

Experiment: Vanillin 2 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vanillin 2 mM
4,275,307	+		Shew_3577	0.83	+0.1
4,275,315	-		Shew_3577	0.85	-0.2
4,275,315	-		Shew_3577	0.85	+0.1
4,275,839	-		Shew_3578	0.86	-0.4
4,275,839	-		Shew_3578	0.86	+0.1
4,275,972	+		Shew_3579	0.14	-0.3
4,275,980	-		Shew_3579	0.16	-0.7
4,276,096	+		Shew_3579	0.37	-0.1
4,276,096	+		Shew_3579	0.37	-0.0
4,276,291	+		Shew_3579	0.72	+0.3
4,276,299	-		Shew_3579	0.74	-0.8
4,276,363	+		Shew_3579	0.85	-0.6
4,276,371	-		Shew_3579	0.87	+0.2
4,276,475	-				-0.1
4,276,476	+				+0.0
4,276,767	-				-0.2
4,276,816	-		Shew_3580	0.11	+0.2
4,276,944	-		Shew_3580	0.20	+0.4
4,276,949	-		Shew_3580	0.20	+0.4
4,277,080	-		Shew_3580	0.29	+0.2
4,277,104	+		Shew_3580	0.31	-0.1
4,277,104	+		Shew_3580	0.31	-0.0
4,277,104	+		Shew_3580	0.31	+0.4
4,277,112	-		Shew_3580	0.31	+0.1
4,277,112	-		Shew_3580	0.31	+0.1
4,277,112	-		Shew_3580	0.31	-1.6
4,277,341	-		Shew_3580	0.47	+0.2