Experiment: m.b. benzoic 0.16 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_1691 and Dshi_1692 are separated by 97 nucleotides Dshi_1692 and Dshi_1693 overlap by 4 nucleotides Dshi_1693 and Dshi_1694 are separated by 61 nucleotides
Dshi_1691: Dshi_1691 - cobalamin (vitamin B12) biosynthesis CbiD protein (RefSeq), at 1,759,483 to 1,760,532
_1691
Dshi_1692: Dshi_1692 - uroporphyrin-III C-methyltransferase (RefSeq), at 1,760,630 to 1,761,475
_1692
Dshi_1693: Dshi_1693 - cobyrinic acid a,c-diamide synthase (RefSeq), at 1,761,472 to 1,762,767
_1693
Dshi_1694: Dshi_1694 - major facilitator superfamily MFS_1 (RefSeq), at 1,762,829 to 1,764,055
_1694
Position (kb) 1761
1762
1763 Strain fitness (log2 ratio) -1
0
1 at 1760.580 kb on - strand at 1760.901 kb on - strand, within Dshi_1692 at 1763.205 kb on - strand, within Dshi_1694 at 1763.302 kb on - strand, within Dshi_1694 at 1763.302 kb on - strand, within Dshi_1694 at 1763.312 kb on - strand, within Dshi_1694 at 1763.333 kb on - strand, within Dshi_1694 at 1763.427 kb on - strand, within Dshi_1694 at 1763.454 kb on - strand, within Dshi_1694 at 1763.684 kb on - strand, within Dshi_1694
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. benzoic 0.16 mg/ml remove 1,760,580 - -0.0 1,760,901 - Dshi_1692 0.32 -0.2 1,763,205 - Dshi_1694 0.31 +1.2 1,763,302 - Dshi_1694 0.39 -0.6 1,763,302 - Dshi_1694 0.39 -0.8 1,763,312 - Dshi_1694 0.39 +0.5 1,763,333 - Dshi_1694 0.41 +1.6 1,763,427 - Dshi_1694 0.49 +1.1 1,763,454 - Dshi_1694 0.51 +0.6 1,763,684 - Dshi_1694 0.70 +0.3
Or see this region's nucleotide sequence