Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_1692

Experiment: m.b. benzoic 0.16 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDshi_1691 and Dshi_1692 are separated by 97 nucleotidesDshi_1692 and Dshi_1693 overlap by 4 nucleotides Dshi_1691: Dshi_1691 - cobalamin (vitamin B12) biosynthesis CbiD protein (RefSeq), at 1,759,483 to 1,760,532 _1691 Dshi_1692: Dshi_1692 - uroporphyrin-III C-methyltransferase (RefSeq), at 1,760,630 to 1,761,475 _1692 Dshi_1693: Dshi_1693 - cobyrinic acid a,c-diamide synthase (RefSeq), at 1,761,472 to 1,762,767 _1693 Position (kb) 1760 1761 1762Strain fitness (log2 ratio) -1 0 1at 1760.580 kb on - strandat 1760.901 kb on - strand, within Dshi_1692

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. benzoic 0.16 mg/ml
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1,760,580 - -0.0
1,760,901 - Dshi_1692 0.32 -0.2

Or see this region's nucleotide sequence