Experiment: m.b. benzoic 0.16 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0899 and Dshi_0900 are separated by 14 nucleotides Dshi_0900 and Dshi_0901 are separated by 4 nucleotides Dshi_0901 and Dshi_0902 overlap by 4 nucleotides
Dshi_0899: Dshi_0899 - hypothetical protein (RefSeq), at 921,315 to 922,355
_0899
Dshi_0900: Dshi_0900 - hypothetical protein (RefSeq), at 922,370 to 924,292
_0900
Dshi_0901: Dshi_0901 - ABC transporter related (RefSeq), at 924,297 to 925,022
_0901
Dshi_0902: Dshi_0902 - protein of unknown function DUF214 (RefSeq), at 925,019 to 926,218
_0902
Position (kb) 922
923
924
925 Strain fitness (log2 ratio) -1
0
1
2
3 at 921.577 kb on - strand, within Dshi_0899 at 921.607 kb on + strand, within Dshi_0899 at 921.864 kb on - strand, within Dshi_0899 at 921.866 kb on + strand, within Dshi_0899 at 921.874 kb on - strand at 922.016 kb on + strand, within Dshi_0899 at 922.033 kb on + strand, within Dshi_0899 at 922.088 kb on + strand, within Dshi_0899 at 922.155 kb on + strand, within Dshi_0899 at 922.163 kb on - strand, within Dshi_0899 at 922.262 kb on + strand at 922.294 kb on + strand at 922.317 kb on - strand at 922.372 kb on - strand at 922.387 kb on + strand at 922.490 kb on + strand at 922.521 kb on - strand at 922.540 kb on - strand at 922.634 kb on - strand, within Dshi_0900 at 922.693 kb on - strand, within Dshi_0900 at 922.757 kb on - strand, within Dshi_0900 at 922.887 kb on - strand, within Dshi_0900 at 923.027 kb on - strand, within Dshi_0900 at 923.068 kb on + strand, within Dshi_0900 at 923.068 kb on + strand, within Dshi_0900 at 923.113 kb on + strand, within Dshi_0900 at 923.143 kb on + strand, within Dshi_0900 at 923.296 kb on - strand, within Dshi_0900 at 923.319 kb on + strand, within Dshi_0900 at 923.473 kb on + strand, within Dshi_0900 at 923.559 kb on + strand, within Dshi_0900 at 923.582 kb on - strand, within Dshi_0900 at 923.646 kb on - strand, within Dshi_0900 at 923.918 kb on - strand, within Dshi_0900 at 923.989 kb on + strand, within Dshi_0900 at 924.040 kb on + strand, within Dshi_0900 at 924.217 kb on + strand at 924.432 kb on + strand, within Dshi_0901 at 924.666 kb on + strand, within Dshi_0901 at 924.673 kb on - strand, within Dshi_0901 at 924.731 kb on + strand, within Dshi_0901 at 924.774 kb on - strand, within Dshi_0901 at 924.886 kb on - strand, within Dshi_0901 at 924.993 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. benzoic 0.16 mg/ml remove 921,577 - Dshi_0899 0.25 +0.1 921,607 + Dshi_0899 0.28 +1.2 921,864 - Dshi_0899 0.53 +1.2 921,866 + Dshi_0899 0.53 -0.3 921,874 - +0.7 922,016 + Dshi_0899 0.67 +0.3 922,033 + Dshi_0899 0.69 +0.2 922,088 + Dshi_0899 0.74 +1.2 922,155 + Dshi_0899 0.81 +0.2 922,163 - Dshi_0899 0.81 +0.1 922,262 + +1.1 922,294 + +3.2 922,317 - +1.7 922,372 - +1.5 922,387 + +1.2 922,490 + +1.4 922,521 - +0.5 922,540 - +0.1 922,634 - Dshi_0900 0.14 +1.7 922,693 - Dshi_0900 0.17 -0.2 922,757 - Dshi_0900 0.20 +2.2 922,887 - Dshi_0900 0.27 +1.0 923,027 - Dshi_0900 0.34 +1.7 923,068 + Dshi_0900 0.36 +1.8 923,068 + Dshi_0900 0.36 -0.8 923,113 + Dshi_0900 0.39 +1.0 923,143 + Dshi_0900 0.40 -0.1 923,296 - Dshi_0900 0.48 +0.4 923,319 + Dshi_0900 0.49 +1.0 923,473 + Dshi_0900 0.57 +0.2 923,559 + Dshi_0900 0.62 +1.1 923,582 - Dshi_0900 0.63 +0.9 923,646 - Dshi_0900 0.66 +0.7 923,918 - Dshi_0900 0.80 +0.8 923,989 + Dshi_0900 0.84 +1.2 924,040 + Dshi_0900 0.87 +2.2 924,217 + +2.1 924,432 + Dshi_0901 0.19 -0.9 924,666 + Dshi_0901 0.51 -0.8 924,673 - Dshi_0901 0.52 +0.6 924,731 + Dshi_0901 0.60 +0.9 924,774 - Dshi_0901 0.66 +1.1 924,886 - Dshi_0901 0.81 +0.9 924,993 - -0.3
Or see this region's nucleotide sequence