Experiment: m.b. benzoic 0.16 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0740 and Dshi_0741 are separated by 39 nucleotides Dshi_0741 and Dshi_0742 overlap by 4 nucleotides Dshi_0742 and Dshi_0743 are separated by 162 nucleotides
Dshi_0740: Dshi_0740 - Polyphosphate kinase (RefSeq), at 746,526 to 748,700
_0740
Dshi_0741: Dshi_0741 - chromosomal replication initiator, DnaA (RefSeq), at 748,740 to 749,429
_0741
Dshi_0742: Dshi_0742 - protein of unknown function UPF0118 (RefSeq), at 749,426 to 750,511
_0742
Dshi_0743: Dshi_0743 - MscS Mechanosensitive ion channel (RefSeq), at 750,674 to 752,056
_0743
Position (kb) 749
750
751 Strain fitness (log2 ratio) -1
0
1 at 748.576 kb on - strand at 748.604 kb on + strand at 748.650 kb on - strand at 748.674 kb on - strand at 749.487 kb on + strand at 750.514 kb on - strand at 750.514 kb on - strand at 750.578 kb on - strand at 750.656 kb on - strand at 750.670 kb on + strand at 750.739 kb on + strand at 750.747 kb on - strand at 750.760 kb on - strand at 750.788 kb on - strand at 750.800 kb on + strand at 750.891 kb on + strand, within Dshi_0743 at 750.923 kb on - strand, within Dshi_0743 at 751.014 kb on + strand, within Dshi_0743 at 751.034 kb on + strand, within Dshi_0743 at 751.044 kb on + strand, within Dshi_0743 at 751.129 kb on - strand, within Dshi_0743 at 751.194 kb on - strand, within Dshi_0743 at 751.260 kb on + strand, within Dshi_0743 at 751.261 kb on + strand, within Dshi_0743 at 751.268 kb on - strand, within Dshi_0743 at 751.425 kb on - strand, within Dshi_0743 at 751.479 kb on + strand, within Dshi_0743 at 751.479 kb on + strand, within Dshi_0743 at 751.487 kb on - strand, within Dshi_0743
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. benzoic 0.16 mg/ml remove 748,576 - -1.1 748,604 + -1.7 748,650 - -0.0 748,674 - -0.6 749,487 + +0.9 750,514 - -0.3 750,514 - -1.2 750,578 - +0.2 750,656 - -0.5 750,670 + -0.1 750,739 + -1.7 750,747 - +0.2 750,760 - +0.0 750,788 - -0.2 750,800 + -0.4 750,891 + Dshi_0743 0.16 +0.1 750,923 - Dshi_0743 0.18 -1.3 751,014 + Dshi_0743 0.25 +0.4 751,034 + Dshi_0743 0.26 -0.5 751,044 + Dshi_0743 0.27 -0.5 751,129 - Dshi_0743 0.33 +0.5 751,194 - Dshi_0743 0.38 -1.6 751,260 + Dshi_0743 0.42 +0.4 751,261 + Dshi_0743 0.42 -0.4 751,268 - Dshi_0743 0.43 +0.3 751,425 - Dshi_0743 0.54 +0.7 751,479 + Dshi_0743 0.58 -0.6 751,479 + Dshi_0743 0.58 +0.8 751,487 - Dshi_0743 0.59 -0.1
Or see this region's nucleotide sequence