Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS11120

Experiment: R2A with Calcium chloride 125 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Calcium chloride 125 mM
2,465,643	+		LRK54_RS11115	0.71	+1.3
2,465,643	+		LRK54_RS11115	0.71	+0.6
2,465,643	+		LRK54_RS11115	0.71	+1.6
2,465,643	+		LRK54_RS11115	0.71	+1.6
2,465,643	+		LRK54_RS11115	0.71	-0.8
2,465,643	+		LRK54_RS11115	0.71	-1.0
2,465,644	-		LRK54_RS11115	0.71	+1.8
2,465,644	-		LRK54_RS11115	0.71	+0.3
2,465,644	-		LRK54_RS11115	0.71	+0.8
2,465,644	-		LRK54_RS11115	0.71	+1.3
2,465,700	+		LRK54_RS11115	0.73	+2.1
2,465,700	+		LRK54_RS11115	0.73	+2.0
2,465,701	-		LRK54_RS11115	0.73	+2.3
2,465,701	-		LRK54_RS11115	0.73	-1.2
2,465,712	+		LRK54_RS11115	0.74	+2.7
2,465,712	+		LRK54_RS11115	0.74	+2.2
2,465,712	+		LRK54_RS11115	0.74	+2.4
2,465,712	+		LRK54_RS11115	0.74	+2.1
2,465,712	+		LRK54_RS11115	0.74	+3.4
2,465,712	+		LRK54_RS11115	0.74	+1.7
2,465,712	+		LRK54_RS11115	0.74	+3.0
2,465,712	+		LRK54_RS11115	0.74	+2.3
2,465,712	+		LRK54_RS11115	0.74	+0.8
2,465,712	+		LRK54_RS11115	0.74	-1.4
2,465,712	+		LRK54_RS11115	0.74	+3.0
2,465,712	+		LRK54_RS11115	0.74	+2.1
2,465,712	+		LRK54_RS11115	0.74	+2.9
2,465,712	+		LRK54_RS11115	0.74	+3.0
2,465,712	+		LRK54_RS11115	0.74	+3.1
2,465,712	+		LRK54_RS11115	0.74	+3.0
2,465,712	+		LRK54_RS11115	0.74	+2.8
2,465,712	+		LRK54_RS11115	0.74	+3.5
2,465,712	+		LRK54_RS11115	0.74	+3.0
2,465,712	+		LRK54_RS11115	0.74	+1.1
2,465,712	+		LRK54_RS11115	0.74	+2.5
2,465,712	+		LRK54_RS11115	0.74	+2.5
2,465,712	+		LRK54_RS11115	0.74	+3.2
2,465,712	+		LRK54_RS11115	0.74	+0.9
2,465,712	+		LRK54_RS11115	0.74	+3.4
2,465,713	-		LRK54_RS11115	0.74	+1.7
2,465,713	-		LRK54_RS11115	0.74	+1.3
2,465,713	-		LRK54_RS11115	0.74	+3.0
2,465,713	-		LRK54_RS11115	0.74	+2.3
2,465,713	-		LRK54_RS11115	0.74	+1.0
2,465,713	-		LRK54_RS11115	0.74	+2.5
2,465,713	-		LRK54_RS11115	0.74	+2.7
2,465,713	-		LRK54_RS11115	0.74	+4.6
2,465,713	-		LRK54_RS11115	0.74	+3.6
2,465,713	-		LRK54_RS11115	0.74	+0.6
2,465,713	-		LRK54_RS11115	0.74	+2.1
2,465,713	-		LRK54_RS11115	0.74	+2.7
2,465,713	-		LRK54_RS11115	0.74	+0.0
2,465,713	-		LRK54_RS11115	0.74	+1.0
2,465,713	-		LRK54_RS11115	0.74	+3.1
2,465,713	-		LRK54_RS11115	0.74	+2.6
2,465,713	-		LRK54_RS11115	0.74	-2.2
2,465,713	-		LRK54_RS11115	0.74	+1.8
2,465,713	-		LRK54_RS11115	0.74	+2.3
2,465,713	-		LRK54_RS11115	0.74	+2.0
2,465,713	-		LRK54_RS11115	0.74	+1.8
2,465,713	-		LRK54_RS11115	0.74	+1.4
2,465,713	-		LRK54_RS11115	0.74	+2.6
2,465,713	-		LRK54_RS11115	0.74	+3.6
2,465,713	-		LRK54_RS11115	0.74	+3.9
2,465,713	-		LRK54_RS11115	0.74	+0.6
2,465,713	-		LRK54_RS11115	0.74	+2.2
2,465,713	-		LRK54_RS11115	0.74	+1.7
2,465,713	-		LRK54_RS11115	0.74	+1.4
2,465,713	-		LRK54_RS11115	0.74	+1.9
2,465,754	+		LRK54_RS11115	0.75	+3.1
2,465,754	+		LRK54_RS11115	0.75	+1.6
2,465,754	+		LRK54_RS11115	0.75	+2.0
2,465,754	+		LRK54_RS11115	0.75	+1.9
2,465,754	+		LRK54_RS11115	0.75	+1.8
2,465,754	+		LRK54_RS11115	0.75	+2.6
2,465,754	+		LRK54_RS11115	0.75	+1.4
2,465,755	-		LRK54_RS11115	0.75	+1.6
2,465,755	-		LRK54_RS11115	0.75	+1.6
2,465,755	-		LRK54_RS11115	0.75	+2.8
2,465,755	-		LRK54_RS11115	0.75	+1.6
2,465,755	-		LRK54_RS11115	0.75	+1.1
2,465,755	-		LRK54_RS11115	0.75	+1.9
2,465,755	-		LRK54_RS11115	0.75	+1.5
2,465,808	+		LRK54_RS11115	0.77	+2.7
2,465,808	+		LRK54_RS11115	0.77	+3.2
2,465,808	+		LRK54_RS11115	0.77	+1.9
2,465,808	+		LRK54_RS11115	0.77	+2.1
2,465,808	+		LRK54_RS11115	0.77	+2.1
2,465,808	+		LRK54_RS11115	0.77	+2.2
2,465,808	+		LRK54_RS11115	0.77	+3.2
2,465,808	+		LRK54_RS11115	0.77	+1.4
2,465,808	+		LRK54_RS11115	0.77	+3.1
2,465,808	+		LRK54_RS11115	0.77	+3.1
2,465,808	+		LRK54_RS11115	0.77	+3.0
2,465,808	+		LRK54_RS11115	0.77	+2.1
2,465,808	+		LRK54_RS11115	0.77	+3.6
2,465,808	+		LRK54_RS11115	0.77	+3.3
2,465,808	+		LRK54_RS11115	0.77	+3.9
2,465,808	+		LRK54_RS11115	0.77	+1.9
2,465,808	+		LRK54_RS11115	0.77	+3.1
2,465,808	+		LRK54_RS11115	0.77	+2.6
2,465,808	+		LRK54_RS11115	0.77	+1.1
2,465,808	+		LRK54_RS11115	0.77	+2.2
2,465,808	+		LRK54_RS11115	0.77	+2.8
2,465,808	+		LRK54_RS11115	0.77	+3.8
2,465,808	+		LRK54_RS11115	0.77	+4.0
2,465,809	-		LRK54_RS11115	0.77	+1.2
2,465,809	-		LRK54_RS11115	0.77	+1.7
2,465,809	-		LRK54_RS11115	0.77	+0.7
2,465,809	-		LRK54_RS11115	0.77	+1.7
2,465,809	-		LRK54_RS11115	0.77	+2.5
2,465,809	-		LRK54_RS11115	0.77	+1.5
2,465,809	-		LRK54_RS11115	0.77	+2.1
2,465,809	-		LRK54_RS11115	0.77	+6.1
2,465,809	-		LRK54_RS11115	0.77	+1.9
2,465,809	-		LRK54_RS11115	0.77	+2.1
2,465,809	-		LRK54_RS11115	0.77	-0.4
2,465,809	-		LRK54_RS11115	0.77	+4.4
2,465,809	-		LRK54_RS11115	0.77	-0.0
2,465,809	-		LRK54_RS11115	0.77	+3.6
2,465,809	-		LRK54_RS11115	0.77	+1.4
2,465,826	+		LRK54_RS11115	0.77	+2.5
2,465,826	+		LRK54_RS11115	0.77	+0.2
2,465,826	+		LRK54_RS11115	0.77	+1.9
2,465,826	+		LRK54_RS11115	0.77	+1.5
2,465,826	+		LRK54_RS11115	0.77	+2.9
2,465,826	+		LRK54_RS11115	0.77	+0.9
2,465,826	+		LRK54_RS11115	0.77	+1.6
2,465,827	-		LRK54_RS11115	0.77	-0.0
2,465,827	-		LRK54_RS11115	0.77	+2.9
2,465,827	-		LRK54_RS11115	0.77	-0.4
2,465,827	-		LRK54_RS11115	0.77	+1.4
2,465,949	+		LRK54_RS11115	0.82	+3.1
2,465,949	+		LRK54_RS11115	0.82	+2.0
2,465,950	-		LRK54_RS11115	0.82	+0.8
2,465,950	-		LRK54_RS11115	0.82	+0.8
2,465,950	-		LRK54_RS11115	0.82	-1.8
2,466,003	+		LRK54_RS11115	0.83	+2.0
2,466,003	+		LRK54_RS11115	0.83	+2.4
2,466,003	+		LRK54_RS11115	0.83	+1.0
2,466,003	+		LRK54_RS11115	0.83	+3.1
2,466,003	+		LRK54_RS11115	0.83	+1.6
2,466,003	+		LRK54_RS11115	0.83	+2.8
2,466,003	+		LRK54_RS11115	0.83	+1.6
2,466,003	+		LRK54_RS11115	0.83	+2.2
2,466,003	+		LRK54_RS11115	0.83	+1.6
2,466,003	+		LRK54_RS11115	0.83	+5.6
2,466,003	+		LRK54_RS11115	0.83	+2.9
2,466,003	+		LRK54_RS11115	0.83	+2.3
2,466,003	+		LRK54_RS11115	0.83	+1.9
2,466,003	+		LRK54_RS11115	0.83	+1.3
2,466,003	+		LRK54_RS11115	0.83	+3.3
2,466,003	+		LRK54_RS11115	0.83	+2.6
2,466,003	+		LRK54_RS11115	0.83	+2.2
2,466,003	+		LRK54_RS11115	0.83	-0.8
2,466,003	+		LRK54_RS11115	0.83	+3.8
2,466,003	+		LRK54_RS11115	0.83	+3.0
2,466,003	+		LRK54_RS11115	0.83	+1.1
2,466,003	+		LRK54_RS11115	0.83	+2.6
2,466,003	+		LRK54_RS11115	0.83	+3.9
2,466,003	+		LRK54_RS11115	0.83	+1.5
2,466,003	+		LRK54_RS11115	0.83	+1.6
2,466,003	+		LRK54_RS11115	0.83	+3.7
2,466,003	+		LRK54_RS11115	0.83	+2.8
2,466,003	+		LRK54_RS11115	0.83	+2.0
2,466,003	+		LRK54_RS11115	0.83	+3.6
2,466,003	+		LRK54_RS11115	0.83	+2.4
2,466,003	+		LRK54_RS11115	0.83	+1.6
2,466,003	+		LRK54_RS11115	0.83	+2.3
2,466,003	+		LRK54_RS11115	0.83	+2.9
2,466,003	+		LRK54_RS11115	0.83	+1.4
2,466,003	+		LRK54_RS11115	0.83	+2.6
2,466,003	+		LRK54_RS11115	0.83	+2.3
2,466,003	+		LRK54_RS11115	0.83	+2.0
2,466,003	+		LRK54_RS11115	0.83	+1.2
2,466,003	+		LRK54_RS11115	0.83	+3.4
2,466,003	+		LRK54_RS11115	0.83	+3.0
2,466,003	+		LRK54_RS11115	0.83	-0.4
2,466,003	+		LRK54_RS11115	0.83	-1.0
2,466,003	+		LRK54_RS11115	0.83	+1.3
2,466,003	+		LRK54_RS11115	0.83	+2.4
2,466,003	+		LRK54_RS11115	0.83	+2.0
2,466,003	+		LRK54_RS11115	0.83	+2.0
2,466,003	+		LRK54_RS11115	0.83	+2.2
2,466,003	+		LRK54_RS11115	0.83	+0.8
2,466,003	+		LRK54_RS11115	0.83	+2.0
2,466,003	+		LRK54_RS11115	0.83	+1.2
2,466,003	+		LRK54_RS11115	0.83	+4.3
2,466,003	+		LRK54_RS11115	0.83	+2.2
2,466,003	+		LRK54_RS11115	0.83	+0.4
2,466,003	+		LRK54_RS11115	0.83	+2.4
2,466,003	+		LRK54_RS11115	0.83	+2.8
2,466,003	+		LRK54_RS11115	0.83	+2.5
2,466,003	+		LRK54_RS11115	0.83	+2.7
2,466,003	+		LRK54_RS11115	0.83	+1.2
2,466,003	+		LRK54_RS11115	0.83	+5.1
2,466,003	+		LRK54_RS11115	0.83	+2.6
2,466,003	+		LRK54_RS11115	0.83	+2.5
2,466,003	+		LRK54_RS11115	0.83	+3.6
2,466,003	+		LRK54_RS11115	0.83	+2.8
2,466,003	+		LRK54_RS11115	0.83	+2.8
2,466,004	-		LRK54_RS11115	0.83	+0.3
2,466,004	-		LRK54_RS11115	0.83	+2.1
2,466,004	-		LRK54_RS11115	0.83	+1.7
2,466,004	-		LRK54_RS11115	0.83	+1.1
2,466,004	-		LRK54_RS11115	0.83	+1.4
2,466,004	-		LRK54_RS11115	0.83	-0.6
2,466,004	-		LRK54_RS11115	0.83	+1.1
2,466,004	-		LRK54_RS11115	0.83	+0.1
2,466,004	-		LRK54_RS11115	0.83	+2.7
2,466,004	-		LRK54_RS11115	0.83	+0.4
2,466,004	-		LRK54_RS11115	0.83	+1.0
2,466,004	-		LRK54_RS11115	0.83	+2.0
2,466,004	-		LRK54_RS11115	0.83	+1.8
2,466,004	-		LRK54_RS11115	0.83	-1.0
2,466,004	-		LRK54_RS11115	0.83	+1.0
2,466,004	-		LRK54_RS11115	0.83	+1.3
2,466,004	-		LRK54_RS11115	0.83	+1.7
2,466,004	-		LRK54_RS11115	0.83	+1.7
2,466,004	-		LRK54_RS11115	0.83	+5.4
2,466,004	-		LRK54_RS11115	0.83	+2.2
2,466,004	-		LRK54_RS11115	0.83	+1.6
2,466,004	-		LRK54_RS11115	0.83	+2.7
2,466,004	-		LRK54_RS11115	0.83	+2.7
2,466,004	-		LRK54_RS11115	0.83	+1.6
2,466,004	-		LRK54_RS11115	0.83	+2.1
2,466,004	-		LRK54_RS11115	0.83	+2.1
2,466,004	-		LRK54_RS11115	0.83	+2.6
2,466,004	-		LRK54_RS11115	0.83	-1.0
2,466,004	-		LRK54_RS11115	0.83	+0.6
2,466,004	-		LRK54_RS11115	0.83	+1.4
2,466,004	-		LRK54_RS11115	0.83	+1.4
2,466,004	-		LRK54_RS11115	0.83	+0.8
2,466,004	-		LRK54_RS11115	0.83	+1.9
2,466,004	-		LRK54_RS11115	0.83	+0.4
2,466,004	-		LRK54_RS11115	0.83	+2.3
2,466,004	-		LRK54_RS11115	0.83	+1.5
2,466,004	-		LRK54_RS11115	0.83	+2.7
2,466,004	-		LRK54_RS11115	0.83	+2.2
2,466,004	-		LRK54_RS11115	0.83	+0.8
2,466,004	-		LRK54_RS11115	0.83	+0.9
2,466,004	-		LRK54_RS11115	0.83	+0.8
2,466,004	-		LRK54_RS11115	0.83	+2.5
2,466,004	-		LRK54_RS11115	0.83	+5.5
2,466,004	-		LRK54_RS11115	0.83	+0.2
2,466,004	-		LRK54_RS11115	0.83	-0.0
2,466,004	-		LRK54_RS11115	0.83	+1.0
2,466,004	-		LRK54_RS11115	0.83	+0.6
2,466,004	-		LRK54_RS11115	0.83	+1.1
2,466,004	-		LRK54_RS11115	0.83	+2.7
2,466,004	-		LRK54_RS11115	0.83	+0.7
2,466,004	-		LRK54_RS11115	0.83	+2.0
2,466,004	-		LRK54_RS11115	0.83	+2.3
2,466,004	-		LRK54_RS11115	0.83	+2.1
2,466,004	-		LRK54_RS11115	0.83	+1.4
2,466,004	-		LRK54_RS11115	0.83	+0.4
2,466,004	-		LRK54_RS11115	0.83	+1.7
2,466,004	-		LRK54_RS11115	0.83	+2.1
2,466,004	-		LRK54_RS11115	0.83	-1.0
2,466,004	-		LRK54_RS11115	0.83	-0.4
2,466,004	-		LRK54_RS11115	0.83	+3.7
2,466,004	-		LRK54_RS11115	0.83	+1.2
2,466,004	-		LRK54_RS11115	0.83	+1.6
2,466,004	-		LRK54_RS11115	0.83	+2.2
2,466,004	-		LRK54_RS11115	0.83	+1.6
2,466,004	-		LRK54_RS11115	0.83	+1.5
2,466,004	-		LRK54_RS11115	0.83	+1.7
2,466,004	-		LRK54_RS11115	0.83	+1.6
2,466,015	+		LRK54_RS11115	0.84	+2.1
2,466,016	-		LRK54_RS11115	0.84	+0.2
2,466,207	+				+0.7
2,466,207	+				-1.6
2,466,207	+				+1.4
2,466,207	+				+1.4
2,466,207	+				+0.1
2,466,207	+				+0.3
2,466,207	+				-0.2
2,466,207	+				+1.1
2,466,207	+				-0.2
2,466,207	+				+0.3
2,466,207	+				-0.3
2,466,207	+				+0.8
2,466,207	+				+2.1
2,466,207	+				-0.0
2,466,208	-				+1.1
2,466,208	-				-0.8
2,466,208	-				+0.6
2,466,208	-				+1.1
2,466,208	-				+1.4
2,466,208	-				-0.1
2,466,291	+				+1.0
2,466,291	+				+0.8
2,466,291	+				+1.6
2,466,291	+				+2.2
2,466,291	+				+1.1
2,466,291	+				-1.3
2,466,291	+				+0.1
2,466,291	+				+1.5
2,466,291	+				+1.8
2,466,291	+				+1.0
2,466,291	+				+1.6
2,466,291	+				-0.2
2,466,292	-				+1.2
2,466,292	-				-1.2
2,466,292	-				+0.1
2,466,292	-				+0.6
2,466,292	-				-3.2
2,466,292	-				+1.1
2,466,292	-				+1.0
2,466,292	-				+0.7
2,466,292	-				-0.2
2,466,292	-				-0.5
2,466,292	-				+2.7
2,466,292	-				+0.8
2,466,292	-				-2.4
2,466,292	-				-0.2
2,466,292	-				-0.4
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2,466,306	+				+2.0
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2,466,306	+				+2.7
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2,466,306	+				+1.9
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2,466,306	+				+3.3
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2,466,795	-		LRK54_RS11120	0.12	+1.1
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2,466,845	+		LRK54_RS11120	0.14	+1.1
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2,466,846	-		LRK54_RS11120	0.14	+1.1
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2,466,846	-		LRK54_RS11120	0.14	+1.1
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2,467,401	-		LRK54_RS11120	0.45	+1.1
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2,467,568	-		LRK54_RS11120	0.54	+1.1
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2,467,784	+		LRK54_RS11120	0.66	+0.1
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2,467,784	+		LRK54_RS11120	0.66	+1.5
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2,467,784	+		LRK54_RS11120	0.66	+0.1
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2,467,784	+		LRK54_RS11120	0.66	-2.3
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2,467,784	+		LRK54_RS11120	0.66	-1.8
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2,467,784	+		LRK54_RS11120	0.66	+1.1
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2,467,785	-		LRK54_RS11120	0.66	+0.3
2,467,785	-		LRK54_RS11120	0.66	+2.1
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2,467,785	-		LRK54_RS11120	0.66	+1.2
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2,467,785	-		LRK54_RS11120	0.66	-1.0
2,467,785	-		LRK54_RS11120	0.66	+1.1
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2,467,785	-		LRK54_RS11120	0.66	+2.3
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2,467,785	-		LRK54_RS11120	0.66	-1.2
2,467,785	-		LRK54_RS11120	0.66	+5.1
2,467,785	-		LRK54_RS11120	0.66	-0.1
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2,467,826	+		LRK54_RS11120	0.68	-0.0
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2,467,826	+		LRK54_RS11120	0.68	+2.0
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2,467,827	-		LRK54_RS11120	0.68	-1.8
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2,467,827	-		LRK54_RS11120	0.68	+1.1
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2,467,919	+		LRK54_RS11120	0.73	-2.2
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2,467,919	+		LRK54_RS11120	0.73	-0.3
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2,467,988	+		LRK54_RS11120	0.77	+0.7
2,467,988	+		LRK54_RS11120	0.77	+0.3
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2,467,988	+		LRK54_RS11120	0.77	-0.0
2,467,988	+		LRK54_RS11120	0.77	+1.6
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2,467,988	+		LRK54_RS11120	0.77	-0.0
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2,467,988	+		LRK54_RS11120	0.77	+1.3
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2,467,989	-		LRK54_RS11120	0.77	+1.3
2,467,989	-		LRK54_RS11120	0.77	+1.1
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2,467,989	-		LRK54_RS11120	0.77	+1.3
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2,467,989	-		LRK54_RS11120	0.77	+2.1
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2,467,989	-		LRK54_RS11120	0.77	+2.1
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2,467,989	-		LRK54_RS11120	0.77	+0.1
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2,468,057	+		LRK54_RS11120	0.81	+1.3
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2,468,057	+		LRK54_RS11120	0.81	+1.1
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2,468,058	-		LRK54_RS11120	0.81	+1.1
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2,468,126	+		LRK54_RS11120	0.84	+0.9
2,468,126	+		LRK54_RS11120	0.84	-0.1
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2,468,258	+				-0.9
2,468,258	+				+0.2
2,468,258	+				+2.6
2,468,258	+				+0.7
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2,468,258	+				-0.4
2,468,258	+				-1.0
2,468,258	+				+1.1
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2,468,258	+				+0.3
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2,468,259	-				-1.6
2,468,259	-				+0.9
2,468,259	-				-1.2
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2,468,881	-		LRK54_RS11125	0.30	-1.6
2,468,881	-		LRK54_RS11125	0.30	+0.1
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2,468,881	-		LRK54_RS11125	0.30	-0.0
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2,469,029	+		LRK54_RS11125	0.40	-0.4