Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3937

Experiment: Paraquat dichloride 0.035 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.035 mg/ml
4,051,832	+				-0.4
4,052,180	+		Ga0059261_3936	0.36	-2.5
4,052,180	+		Ga0059261_3936	0.36	-0.1
4,052,181	-		Ga0059261_3936	0.36	-0.5
4,052,387	+		Ga0059261_3936	0.67	+0.2
4,052,387	+		Ga0059261_3936	0.67	-1.2
4,052,387	+		Ga0059261_3936	0.67	-0.6
4,052,387	+		Ga0059261_3936	0.67	-0.5
4,052,387	+		Ga0059261_3936	0.67	+0.3
4,052,387	+		Ga0059261_3936	0.67	-0.3
4,052,388	-		Ga0059261_3936	0.67	-0.9
4,052,388	-		Ga0059261_3936	0.67	-0.3
4,052,388	-		Ga0059261_3936	0.67	-0.3
4,052,388	-		Ga0059261_3936	0.67	-0.1
4,052,388	-		Ga0059261_3936	0.67	-0.1
4,052,388	-		Ga0059261_3936	0.67	-0.8
4,052,388	-		Ga0059261_3936	0.67	-0.9
4,052,388	-		Ga0059261_3936	0.67	-1.0
4,052,388	-		Ga0059261_3936	0.67	+1.4
4,052,391	+		Ga0059261_3936	0.67	-0.4
4,052,391	+				-0.2
4,052,391	+		Ga0059261_3936	0.67	-1.2
4,052,392	-		Ga0059261_3936	0.67	-0.8
4,052,392	-		Ga0059261_3936	0.67	-0.6
4,052,392	-		Ga0059261_3936	0.67	-0.4
4,052,392	-		Ga0059261_3936	0.67	-0.9
4,052,676	-				+0.2
4,052,676	-				-0.4
4,052,730	+				-0.7
4,052,730	+				-1.2
4,052,731	-				-0.7
4,052,731	-				+1.1
4,052,731	-				+0.0
4,052,880	+		Ga0059261_3937	0.10	-1.7
4,052,892	+				-1.2
4,052,892	+		Ga0059261_3937	0.11	-0.4
4,052,892	+		Ga0059261_3937	0.11	-2.2
4,052,892	+		Ga0059261_3937	0.11	-1.5
4,052,893	-		Ga0059261_3937	0.11	-1.0
4,052,893	-		Ga0059261_3937	0.11	-1.1
4,052,893	-		Ga0059261_3937	0.11	-0.5
4,052,893	-		Ga0059261_3937	0.11	+0.1
4,052,893	-		Ga0059261_3937	0.11	-0.6
4,053,063	+		Ga0059261_3937	0.23	-0.4
4,053,064	-		Ga0059261_3937	0.23	-1.6
4,053,108	+		Ga0059261_3937	0.26	-0.8
4,053,188	+		Ga0059261_3937	0.32	-0.7
4,053,188	+		Ga0059261_3937	0.32	-0.1
4,053,188	+		Ga0059261_3937	0.32	-1.0
4,053,189	-		Ga0059261_3937	0.32	+0.8
4,053,189	-		Ga0059261_3937	0.32	-0.8
4,053,189	-		Ga0059261_3937	0.32	-0.2
4,053,189	-		Ga0059261_3937	0.32	-1.4
4,053,189	-		Ga0059261_3937	0.32	-1.6
4,053,189	-		Ga0059261_3937	0.32	+1.7
4,053,189	-		Ga0059261_3937	0.32	+0.8
4,053,312	+		Ga0059261_3937	0.40	-0.5
4,053,312	+		Ga0059261_3937	0.40	-0.9
4,053,313	-		Ga0059261_3937	0.40	-1.2
4,053,313	-		Ga0059261_3937	0.40	-0.8
4,053,396	+		Ga0059261_3937	0.46	-0.4
4,053,396	+		Ga0059261_3937	0.46	-0.3
4,053,397	-		Ga0059261_3937	0.46	-0.8
4,053,438	-		Ga0059261_3937	0.49	-1.3
4,053,478	-		Ga0059261_3937	0.52	-1.3
4,053,478	-		Ga0059261_3937	0.52	-0.8
4,053,478	-				+0.4
4,053,478	-		Ga0059261_3937	0.52	-1.4
4,053,478	-		Ga0059261_3937	0.52	-0.7
4,053,498	+		Ga0059261_3937	0.53	-1.1
4,053,498	+		Ga0059261_3937	0.53	-2.2
4,053,498	+				+0.8
4,053,498	+		Ga0059261_3937	0.53	-1.0
4,053,498	+		Ga0059261_3937	0.53	-1.1
4,053,498	+		Ga0059261_3937	0.53	-0.9
4,053,498	+		Ga0059261_3937	0.53	-1.7
4,053,498	+		Ga0059261_3937	0.53	-1.7
4,053,498	+		Ga0059261_3937	0.53	-0.2
4,053,499	-		Ga0059261_3937	0.54	-2.1
4,053,499	-		Ga0059261_3937	0.54	-0.1
4,053,499	-				-0.2
4,053,499	-		Ga0059261_3937	0.54	-1.2
4,053,499	-		Ga0059261_3937	0.54	-1.2
4,053,545	+		Ga0059261_3937	0.57	-0.5
4,053,545	+		Ga0059261_3937	0.57	-0.5
4,053,595	-		Ga0059261_3937	0.60	-1.4
4,053,627	-		Ga0059261_3937	0.63	-2.0
4,053,645	+		Ga0059261_3937	0.64	-0.8
4,053,646	-		Ga0059261_3937	0.64	-0.5
4,053,681	+		Ga0059261_3937	0.66	-0.9
4,053,681	+		Ga0059261_3937	0.66	-2.4
4,053,681	+		Ga0059261_3937	0.66	-2.3
4,053,682	-		Ga0059261_3937	0.66	-0.6
4,053,682	-		Ga0059261_3937	0.66	+0.1
4,053,682	-		Ga0059261_3937	0.66	-0.8
4,053,682	-		Ga0059261_3937	0.66	-0.8
4,053,682	-		Ga0059261_3937	0.66	-0.7
4,053,682	-		Ga0059261_3937	0.66	+1.7
4,053,682	-		Ga0059261_3937	0.66	+0.2
4,053,683	+				+0.0
4,053,683	+		Ga0059261_3937	0.66	-0.5
4,053,683	+		Ga0059261_3937	0.66	+0.2
4,053,683	+		Ga0059261_3937	0.66	-1.1
4,053,683	+		Ga0059261_3937	0.66	-1.3
4,053,683	+		Ga0059261_3937	0.66	-0.7
4,053,684	-		Ga0059261_3937	0.67	+0.6
4,053,684	-		Ga0059261_3937	0.67	+0.6
4,053,684	-		Ga0059261_3937	0.67	-2.1
4,053,684	-		Ga0059261_3937	0.67	-1.1
4,053,684	-		Ga0059261_3937	0.67	-1.6
4,053,762	+		Ga0059261_3937	0.72	-0.5
4,053,762	+		Ga0059261_3937	0.72	-0.8
4,053,762	+		Ga0059261_3937	0.72	-0.3
4,053,762	+				-0.6
4,053,762	+		Ga0059261_3937	0.72	-0.6
4,053,762	+		Ga0059261_3937	0.72	-0.7
4,053,763	-		Ga0059261_3937	0.72	-1.0
4,053,986	+				+0.0
4,053,987	-		Ga0059261_3937	0.88	+0.0
4,054,041	+				-1.4
4,054,042	-				-0.7
4,054,042	-				-0.8
4,054,083	+				-0.2
4,054,083	+				-0.9
4,054,083	+				-0.2
4,054,083	+				-0.3
4,054,083	+				-0.3
4,054,084	-				-0.3
4,054,084	-				-0.6
4,054,084	-				-1.2
4,054,084	-				-1.0
4,054,084	-				-1.4
4,054,084	-				-0.4
4,054,174	+				-0.7
4,054,175	-				-0.6
4,054,175	-				-0.3
4,054,175	-				-1.2
4,054,175	-				+0.2
4,054,175	-				-1.1
4,054,293	+				-0.2
4,054,294	-		Ga0059261_3938	0.10	-0.3
4,054,388	-		Ga0059261_3938	0.18	-1.6
4,054,463	-		Ga0059261_3938	0.23	-0.5
4,054,463	-		Ga0059261_3938	0.23	-0.2
4,054,495	-				+0.4
4,054,525	+		Ga0059261_3938	0.28	-0.7
4,054,525	+		Ga0059261_3938	0.28	-1.4
4,054,627	+		Ga0059261_3938	0.36	-0.4
4,054,670	+		Ga0059261_3938	0.39	-1.0
4,054,670	+		Ga0059261_3938	0.39	-1.4
4,054,670	+		Ga0059261_3938	0.39	-3.2
4,054,671	-		Ga0059261_3938	0.39	-2.4
4,054,671	-		Ga0059261_3938	0.39	-2.0
4,054,718	+		Ga0059261_3938	0.43	-0.4
4,054,718	+		Ga0059261_3938	0.43	-0.2
4,054,718	+		Ga0059261_3938	0.43	-1.8
4,054,718	+		Ga0059261_3938	0.43	-1.5
4,054,718	+		Ga0059261_3938	0.43	+0.4
4,054,719	-		Ga0059261_3938	0.43	-0.4
4,054,719	-		Ga0059261_3938	0.43	-0.6
4,054,719	-		Ga0059261_3938	0.43	-0.1
4,054,719	-		Ga0059261_3938	0.43	-1.0
4,054,719	-		Ga0059261_3938	0.43	-1.2
4,054,757	+		Ga0059261_3938	0.46	-0.7
4,054,758	-		Ga0059261_3938	0.46	+0.8
4,054,990	+		Ga0059261_3938	0.64	-0.8
4,054,990	+		Ga0059261_3938	0.64	+0.4
4,054,991	-		Ga0059261_3938	0.64	-0.2
4,055,145	+		Ga0059261_3938	0.76	-2.2
4,055,146	-		Ga0059261_3938	0.76	-1.9
4,055,153	+		Ga0059261_3938	0.76	-1.2
4,055,153	+		Ga0059261_3938	0.76	+0.6
4,055,153	+		Ga0059261_3938	0.76	-1.0
4,055,153	+		Ga0059261_3938	0.76	-1.4
4,055,153	+		Ga0059261_3938	0.76	-2.2
4,055,153	+		Ga0059261_3938	0.76	-1.4
4,055,154	-		Ga0059261_3938	0.76	-2.4
4,055,154	-		Ga0059261_3938	0.76	-1.7