Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02004

Experiment: PYE with Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Doxycycline hyclate 0.0001 mg/ml
2,152,348	-				+1.4
2,152,413	-		CCNA_02004	0.43	+2.0
2,152,469	-				-1.0
2,152,540	-				-1.8
2,152,560	+				+0.1
2,152,565	+				-0.7
2,152,565	+				-0.1
2,152,565	+				-2.6
2,152,573	-				+1.2
2,152,573	-				+1.1
2,152,578	-				-1.4
2,152,583	+				+1.2
2,152,617	-				-1.1
2,152,619	+				-0.4
2,152,619	+				+0.5
2,152,619	+				+0.9
2,152,627	-				-0.9
2,152,627	-				-0.7
2,152,627	-				-0.7
2,152,675	+				-1.6
2,152,686	+				-1.2
2,152,699	-				-0.9
2,152,709	-				-0.3
2,152,733	+		CCNA_02005	0.11	+1.9
2,152,741	-		CCNA_02005	0.12	-1.3
2,152,761	+		CCNA_02005	0.14	-0.3
2,152,777	+		CCNA_02005	0.15	+0.7
2,152,806	+		CCNA_02005	0.18	+0.3
2,152,806	+		CCNA_02005	0.18	-1.7
2,152,806	+		CCNA_02005	0.18	+0.0
2,152,848	+		CCNA_02005	0.23	+1.0
2,152,848	+		CCNA_02005	0.23	+0.3
2,152,866	-		CCNA_02005	0.25	-0.1
2,152,868	-		CCNA_02005	0.25	-1.6
2,152,874	-		CCNA_02005	0.26	-1.0
2,152,938	-		CCNA_02005	0.32	+0.2
2,152,966	-		CCNA_02005	0.35	+1.6
2,153,011	+		CCNA_02005	0.40	-3.1
2,153,088	-		CCNA_02005	0.48	+1.9
2,153,088	-		CCNA_02005	0.48	-0.1
2,153,120	+		CCNA_02005	0.51	-0.1
2,153,169	+		CCNA_02005	0.56	-0.7
2,153,177	-		CCNA_02005	0.57	-1.6
2,153,199	-		CCNA_02005	0.59	-0.7
2,153,223	-		CCNA_02005	0.62	-0.8
2,153,250	-		CCNA_02005	0.65	-2.6
2,153,281	-		CCNA_02005	0.68	-0.8
2,153,283	+		CCNA_02005	0.68	-1.4
2,153,291	-		CCNA_02005	0.69	-0.7
2,153,325	+		CCNA_02005	0.72	-2.2
2,153,325	+				+1.9
2,153,352	+		CCNA_02005	0.75	+0.7
2,153,352	+		CCNA_02005	0.75	-0.5
2,153,357	+		CCNA_02005	0.76	-0.8
2,153,360	-		CCNA_02005	0.76	-0.9
2,153,360	-		CCNA_02005	0.76	-1.3
2,153,360	-		CCNA_02005	0.76	+1.9
2,153,360	-		CCNA_02005	0.76	-3.5
2,153,360	-		CCNA_02005	0.76	-0.7
2,153,360	-		CCNA_02005	0.76	-2.6
2,153,373	-		CCNA_02005	0.78	-1.4
2,153,386	+		CCNA_02005	0.79	+0.4