Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01266

Experiment: PYE with Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Doxycycline hyclate 0.0001 mg/ml
1,394,602	+				-0.2
1,394,628	+				+2.1
1,394,628	-				-1.9
1,394,650	+				-0.1
1,394,650	+				+0.5
1,394,731	+				-0.6
1,394,777	-				-1.4
1,395,624	+				+0.3
1,395,624	+				-1.2
1,395,632	-				+2.5
1,395,651	+		CCNA_01266	0.15	+1.0
1,395,659	-		CCNA_01266	0.17	+2.8
1,395,673	+		CCNA_01266	0.21	+1.5
1,395,673	+		CCNA_01266	0.21	+1.6
1,395,673	+		CCNA_01266	0.21	+1.4
1,395,673	+		CCNA_01266	0.21	+2.1
1,395,678	+		CCNA_01266	0.23	+1.2
1,395,681	-		CCNA_01266	0.24	+1.9
1,395,681	-		CCNA_01266	0.24	+0.5
1,395,686	-		CCNA_01266	0.25	+1.0
1,395,713	-		CCNA_01266	0.32	+2.5
1,395,713	-		CCNA_01266	0.32	+0.8
1,395,713	-		CCNA_01266	0.32	+0.2
1,395,713	-		CCNA_01266	0.32	+0.6
1,395,776	+		CCNA_01266	0.50	+1.8
1,395,823	+		CCNA_01266	0.63	+1.8
1,395,831	-		CCNA_01266	0.66	+1.1
1,395,831	-		CCNA_01266	0.66	+0.8
1,395,882	+		CCNA_01266	0.80	+1.0
1,395,882	+		CCNA_01266	0.80	-0.2
1,395,890	-		CCNA_01266	0.82	+0.9
1,395,890	-		CCNA_01266	0.82	-1.0
1,395,904	+		CCNA_01266	0.86	-1.0
1,395,914	+		CCNA_01266	0.89	+2.9
1,395,914	-		CCNA_01266	0.89	-0.1
1,396,011	-				-1.4
1,396,021	-				+0.7
1,396,021	-				-0.5
1,396,021	-				-1.1
1,396,038	+		CCNA_01267	0.12	+0.8
1,396,115	+		CCNA_01267	0.22	+0.8
1,396,135	+		CCNA_01267	0.25	+2.0
1,396,199	+		CCNA_01267	0.34	-0.5
1,396,208	-		CCNA_01267	0.35	+0.2
1,396,209	-		CCNA_01267	0.35	+0.2
1,396,214	-		CCNA_01267	0.36	+0.5
1,396,221	-		CCNA_01267	0.37	-0.5
1,396,326	+		CCNA_01267	0.51	-1.0
1,396,326	+		CCNA_01267	0.51	-1.8
1,396,326	+		CCNA_01267	0.51	-1.7
1,396,334	-		CCNA_01267	0.52	-0.4
1,396,334	-		CCNA_01267	0.52	-0.2
1,396,334	-		CCNA_01267	0.52	-0.6
1,396,334	-		CCNA_01267	0.52	+0.9
1,396,341	+		CCNA_01267	0.53	-1.7
1,396,341	+		CCNA_01267	0.53	+0.2
1,396,343	+		CCNA_01267	0.53	-0.2
1,396,349	-		CCNA_01267	0.54	-1.3
1,396,349	-		CCNA_01267	0.54	+0.1
1,396,349	-		CCNA_01267	0.54	+1.8
1,396,349	-		CCNA_01267	0.54	-0.9
1,396,404	-		CCNA_01267	0.62	+0.1
1,396,404	-		CCNA_01267	0.62	-0.3
1,396,404	-		CCNA_01267	0.62	-0.1
1,396,405	+		CCNA_01267	0.62	+1.1
1,396,408	-		CCNA_01267	0.62	-0.5
1,396,435	-		CCNA_01267	0.66	-1.2
1,396,435	-		CCNA_01267	0.66	+0.8
1,396,435	-		CCNA_01267	0.66	+0.9
1,396,436	+		CCNA_01267	0.66	-1.8
1,396,454	+		CCNA_01267	0.68	+0.8
1,396,470	+		CCNA_01267	0.70	-2.0
1,396,478	-		CCNA_01267	0.72	+0.5
1,396,499	+		CCNA_01267	0.74	-1.7
1,396,527	+		CCNA_01267	0.78	-1.0
1,396,527	+		CCNA_01267	0.78	-0.2
1,396,527	+		CCNA_01267	0.78	-0.4
1,396,532	+		CCNA_01267	0.79	-1.9
1,396,535	-		CCNA_01267	0.79	-0.8
1,396,535	-		CCNA_01267	0.79	-0.8
1,396,567	-		CCNA_01267	0.84	+0.1
1,396,685	-				-0.0
1,396,733	+				+1.8
1,396,798	-				+1.2
1,396,800	+				+0.8
1,396,869	+		CCNA_01268	0.21	+1.8