Strain Fitness in Caulobacter crescentus NA1000 around CCNA_00149

Experiment: PYE with Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Doxycycline hyclate 0.0001 mg/ml
158,124	+		CCNA_00146	0.89	+0.9
158,128	+				-0.6
158,139	+				-1.4
158,147	-				-0.6
158,149	-				-0.1
158,172	-				-1.7
158,174	+				-0.2
158,181	+				+1.1
158,181	+				+0.2
158,189	-				+0.8
158,194	-				-0.4
158,291	+				+3.5
158,294	-				+1.6
158,299	-				+1.0
158,299	-				+1.6
158,309	-				-1.2
158,334	+				+0.9
158,366	+		CCNA_00147	0.10	+0.9
158,434	+		CCNA_00147	0.68	+1.3
158,463	+				+1.1
158,463	+				+1.1
158,464	-				-0.0
158,465	+				+0.8
158,465	+				+0.2
158,465	+				+0.8
158,465	+				+1.1
158,471	-				-0.2
158,471	-				+1.2
158,492	-				-2.0
158,492	-				-0.4
158,517	+				+0.8
158,532	+				+1.7
158,553	+				+0.7
158,553	+				+1.5
158,553	+				+1.5
158,602	+		CCNA_00148	0.10	+2.4
158,620	-		CCNA_00148	0.14	-0.7
158,652	-		CCNA_00148	0.20	+0.3
158,668	-		CCNA_00148	0.23	-0.5
158,670	+		CCNA_00148	0.23	+2.6
158,670	-		CCNA_00148	0.23	+2.0
158,673	-		CCNA_00148	0.24	+1.4
158,707	+		CCNA_00148	0.30	+1.8
158,738	+		CCNA_00148	0.36	+1.7
158,764	+		CCNA_00148	0.41	+1.4
158,772	-		CCNA_00148	0.42	-0.7
158,774	+		CCNA_00148	0.43	+1.7
158,813	+		CCNA_00148	0.50	+1.8
158,819	+		CCNA_00148	0.51	+2.8
158,889	-		CCNA_00148	0.64	+1.8
158,901	+		CCNA_00148	0.66	+1.5
158,956	+		CCNA_00148	0.77	+1.2
158,957	+		CCNA_00148	0.77	+1.8
158,964	-		CCNA_00148	0.78	-1.1
158,982	-		CCNA_00148	0.82	-1.3
159,076	-				+1.2
159,078	+				+2.0
159,078	+				+2.0
159,111	+				+4.8
159,119	-		CCNA_00149	0.10	+2.3
159,124	+		CCNA_00149	0.12	+2.4
159,132	-		CCNA_00149	0.16	-0.6
159,166	-		CCNA_00149	0.31	-0.4
159,188	+		CCNA_00149	0.40	+2.5
159,196	-		CCNA_00149	0.44	+1.0
159,203	-		CCNA_00149	0.47	+3.6
159,227	+		CCNA_00149	0.57	+2.3
159,227	+		CCNA_00149	0.57	+2.2
159,227	+		CCNA_00149	0.57	+2.1
159,230	-		CCNA_00149	0.59	+0.2
159,266	-		CCNA_00149	0.75	-0.6
159,279	+		CCNA_00149	0.80	+2.6
159,345	+				+0.8
159,346	+				+1.9
159,346	+				+0.5
159,354	-				+1.3
159,354	-				+1.1
159,370	+				+0.7
159,391	-				+0.2
159,402	+				+0.5
159,520	-		CCNA_00150	0.20	+0.8
159,531	+		CCNA_00150	0.22	-0.5
159,536	+		CCNA_00150	0.22	+1.6
159,613	+		CCNA_00150	0.30	-0.7
159,613	+		CCNA_00150	0.30	+0.7
159,619	+		CCNA_00150	0.31	+1.0
159,621	-		CCNA_00150	0.31	+0.9
159,651	+		CCNA_00150	0.34	+0.1
159,683	-		CCNA_00150	0.37	+1.4
159,721	-		CCNA_00150	0.41	+1.3
159,756	+		CCNA_00150	0.45	-0.6
159,758	-		CCNA_00150	0.45	+2.0
159,761	+		CCNA_00150	0.45	-0.0
159,769	-		CCNA_00150	0.46	+0.4
159,769	-		CCNA_00150	0.46	+1.7
159,769	-		CCNA_00150	0.46	+1.1
159,769	-		CCNA_00150	0.46	+0.9
159,776	+		CCNA_00150	0.47	-0.9
159,809	-		CCNA_00150	0.50	+2.9
159,821	+		CCNA_00150	0.51	+0.3
159,874	-		CCNA_00150	0.57	+0.3
159,978	+		CCNA_00150	0.67	+0.4
159,990	-		CCNA_00150	0.69	+1.0
159,995	+		CCNA_00150	0.69	+0.6
160,013	+		CCNA_00150	0.71	-1.3
160,018	+		CCNA_00150	0.71	+1.4
160,026	-		CCNA_00150	0.72	+1.1
160,026	-		CCNA_00150	0.72	+1.1
160,056	+		CCNA_00150	0.75	-0.4
160,116	-		CCNA_00150	0.81	+0.8
160,121	-		CCNA_00150	0.82	+1.2
160,154	-				+4.2
160,172	-		CCNA_00150	0.87	+2.3
160,172	-		CCNA_00150	0.87	-0.1
160,176	+		CCNA_00150	0.88	+0.0
160,190	-		CCNA_00150	0.89	+1.1
160,203	+				+0.1
160,211	-				+1.7
160,215	+				-0.4
160,220	+				-0.1
160,238	+				-1.2
160,241	-				+2.0
160,246	-				+1.5
160,259	-				+1.3
160,300	-				+1.1
160,304	+				-0.7
160,304	+				+0.3
160,304	+				+1.6
160,304	+				-1.4
160,305	-				+1.2
160,312	-				+1.4
160,312	-				+0.3
160,314	-				+1.0
160,314	-				+1.4