Experiment: rich MoYLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2234 and DvMF_2235 are separated by 227 nucleotides DvMF_2235 and DvMF_2236 are separated by 396 nucleotides
DvMF_2234: DvMF_2234 - transcriptional regulator, Crp/Fnr family (RefSeq), at 2,796,421 to 2,797,263
_2234
DvMF_2235: DvMF_2235 - translation initiation factor, aIF-2BI family (RefSeq), at 2,797,491 to 2,798,543
_2235
DvMF_2236: DvMF_2236 - isochorismatase hydrolase (RefSeq), at 2,798,940 to 2,799,539
_2236
Position (kb)
2797
2798
2799 Strain fitness (log2 ratio)
-1
0
1 at 2796.630 kb on - strand, within DvMF_2234 at 2796.845 kb on + strand, within DvMF_2234 at 2796.947 kb on + strand, within DvMF_2234 at 2797.436 kb on + strand at 2797.493 kb on + strand at 2797.726 kb on + strand, within DvMF_2235 at 2797.899 kb on + strand, within DvMF_2235 at 2797.939 kb on - strand, within DvMF_2235 at 2798.079 kb on + strand, within DvMF_2235 at 2798.103 kb on + strand, within DvMF_2235 at 2798.231 kb on - strand, within DvMF_2235 at 2798.244 kb on + strand, within DvMF_2235 at 2798.252 kb on - strand, within DvMF_2235 at 2798.259 kb on - strand, within DvMF_2235 at 2798.297 kb on + strand, within DvMF_2235 at 2798.403 kb on + strand, within DvMF_2235 at 2798.559 kb on - strand at 2798.568 kb on + strand at 2798.576 kb on - strand at 2798.576 kb on - strand at 2798.708 kb on - strand at 2798.726 kb on - strand at 2799.018 kb on + strand, within DvMF_2236 at 2799.026 kb on - strand, within DvMF_2236 at 2799.040 kb on + strand, within DvMF_2236 at 2799.055 kb on + strand, within DvMF_2236 at 2799.100 kb on - strand, within DvMF_2236 at 2799.232 kb on - strand, within DvMF_2236
Per-strain Table
Position Strand Gene LocusTag Fraction rich MoYLS4 remove 2,796,630 - DvMF_2234 0.25 -0.4 2,796,845 + DvMF_2234 0.50 -0.6 2,796,947 + DvMF_2234 0.62 -0.0 2,797,436 + -0.6 2,797,493 + -0.7 2,797,726 + DvMF_2235 0.22 -0.7 2,797,899 + DvMF_2235 0.39 -0.4 2,797,939 - DvMF_2235 0.43 -0.3 2,798,079 + DvMF_2235 0.56 -0.3 2,798,103 + DvMF_2235 0.58 -0.9 2,798,231 - DvMF_2235 0.70 -0.6 2,798,244 + DvMF_2235 0.72 -0.2 2,798,252 - DvMF_2235 0.72 -0.2 2,798,259 - DvMF_2235 0.73 -0.2 2,798,297 + DvMF_2235 0.77 -0.5 2,798,403 + DvMF_2235 0.87 -0.3 2,798,559 - -0.3 2,798,568 + +0.9 2,798,576 - -0.3 2,798,576 - -0.3 2,798,708 - -0.4 2,798,726 - -0.6 2,799,018 + DvMF_2236 0.13 -0.2 2,799,026 - DvMF_2236 0.14 -0.4 2,799,040 + DvMF_2236 0.17 +0.4 2,799,055 + DvMF_2236 0.19 -0.7 2,799,100 - DvMF_2236 0.27 -0.2 2,799,232 - DvMF_2236 0.49 -0.4
Or see this region's nucleotide sequence