Experiment: rich MoYLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1987 and DvMF_1988 are separated by 133 nucleotides DvMF_1988 and DvMF_1989 are separated by 334 nucleotides
DvMF_1987: DvMF_1987 - Pyruvate, water dikinase (RefSeq), at 2,459,260 to 2,462,016
_1987
DvMF_1988: DvMF_1988 - response regulator receiver protein (RefSeq), at 2,462,150 to 2,462,509
_1988
DvMF_1989: DvMF_1989 - integral membrane sensor signal transduction histidine kinase (RefSeq), at 2,462,844 to 2,464,544
_1989
Position (kb)
2462
2463 Strain fitness (log2 ratio)
-2
-1
0
1 at 2461.171 kb on - strand, within DvMF_1987 at 2461.183 kb on + strand, within DvMF_1987 at 2461.191 kb on - strand, within DvMF_1987 at 2461.247 kb on - strand, within DvMF_1987 at 2461.600 kb on - strand, within DvMF_1987 at 2461.733 kb on + strand, within DvMF_1987 at 2461.949 kb on + strand at 2461.962 kb on - strand at 2462.431 kb on + strand, within DvMF_1988 at 2462.439 kb on - strand, within DvMF_1988 at 2462.692 kb on + strand at 2462.757 kb on - strand at 2462.814 kb on - strand at 2462.861 kb on + strand at 2462.868 kb on - strand at 2463.030 kb on - strand, within DvMF_1989 at 2463.030 kb on - strand, within DvMF_1989 at 2463.141 kb on - strand, within DvMF_1989 at 2463.174 kb on - strand, within DvMF_1989 at 2463.267 kb on + strand, within DvMF_1989 at 2463.314 kb on + strand, within DvMF_1989
Per-strain Table
Position Strand Gene LocusTag Fraction rich MoYLS4 remove 2,461,171 - DvMF_1987 0.69 -1.7 2,461,183 + DvMF_1987 0.70 -1.4 2,461,191 - DvMF_1987 0.70 +0.1 2,461,247 - DvMF_1987 0.72 -1.4 2,461,600 - DvMF_1987 0.85 -0.7 2,461,733 + DvMF_1987 0.90 -1.5 2,461,949 + -0.5 2,461,962 - -1.0 2,462,431 + DvMF_1988 0.78 -0.3 2,462,439 - DvMF_1988 0.80 -0.6 2,462,692 + -1.9 2,462,757 - -0.4 2,462,814 - -0.7 2,462,861 + -0.4 2,462,868 - -0.7 2,463,030 - DvMF_1989 0.11 -0.8 2,463,030 - DvMF_1989 0.11 -0.6 2,463,141 - DvMF_1989 0.17 -1.0 2,463,174 - DvMF_1989 0.19 -0.9 2,463,267 + DvMF_1989 0.25 -0.9 2,463,314 + DvMF_1989 0.28 -1.0
Or see this region's nucleotide sequence