Strain Fitness in Shewanella loihica PV-4 around Shew_3561

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,251,034	-		Shew_3560	0.10	+1.5
4,251,067	-		Shew_3560	0.14	+1.8
4,251,130	-		Shew_3560	0.20	+1.7
4,251,130	-		Shew_3560	0.20	+1.2
4,251,190	-		Shew_3560	0.25	+1.1
4,251,555	+		Shew_3560	0.60	+2.0
4,251,573	+		Shew_3560	0.61	+1.9
4,251,837	-		Shew_3560	0.86	+2.0
4,252,017	+				-0.5
4,252,147	+				+0.9
4,252,204	-		Shew_3561	0.13	+1.7
4,252,355	+		Shew_3561	0.24	+1.4
4,252,447	+		Shew_3561	0.30	+1.6
4,252,503	-		Shew_3561	0.34	+1.0
4,252,532	-		Shew_3561	0.36	+2.0
4,252,597	+		Shew_3561	0.41	+1.5
4,252,644	+		Shew_3561	0.44	+1.0
4,252,697	+		Shew_3561	0.48	+1.2
4,253,123	-		Shew_3561	0.78	+2.5
4,253,167	+		Shew_3561	0.81	+1.7
4,253,277	-		Shew_3561	0.89	+1.3
4,253,292	+				+1.5
4,253,340	+				+1.3
4,253,340	+				+1.5
4,253,783	+		Shew_3562	0.11	+0.1
4,254,268	-		Shew_3562	0.65	-0.4