Strain Fitness in Shewanella loihica PV-4 around Shew_1981

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,290,278	+				+0.5
2,290,738	-		Shew_1980	0.54	+0.4
2,291,120	+		Shew_1981	0.10	+0.7
2,291,493	-		Shew_1981	0.52	+0.7
2,291,571	-		Shew_1981	0.60	+0.3
2,291,575	-		Shew_1981	0.61	+0.5
2,291,694	-		Shew_1981	0.74	+1.1
2,291,744	-		Shew_1981	0.79	+0.6
2,291,936	+				-0.1
2,291,960	+				+0.0
2,292,002	+				+0.1
2,292,131	-				+0.1
2,292,310	+				+0.4
2,292,386	+				+0.2
2,292,402	-				+0.1
2,292,527	-				+0.3
2,292,614	-				+0.2
2,292,624	+				+0.8
2,292,624	+				+0.6
2,292,624	+				-0.2
2,292,624	+				-0.6
2,292,632	-				+0.3
2,292,632	-				-0.6
2,292,632	-				+0.2
2,292,632	-				-0.8
2,292,906	-				+0.9