Strain Fitness in Shewanella loihica PV-4 around Shew_1348

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,555,859	-	flgD	Shew_1347	0.43	-0.4
1,555,920	-	flgD	Shew_1347	0.51	-0.2
1,556,331	+				-0.9
1,556,525	-	flgE	Shew_1348	0.12	-0.7
1,557,249	-	flgE	Shew_1348	0.65	+0.2
1,557,448	+	flgE	Shew_1348	0.79	-1.4
1,557,535	-	flgE	Shew_1348	0.86	-0.4
1,557,710	+				+0.1
1,558,048	+	flgF	Shew_1349	0.16	+0.1
1,558,061	-	flgF	Shew_1349	0.18	+0.4
1,558,227	-	flgF	Shew_1349	0.40	+0.1
1,558,313	+	flgF	Shew_1349	0.52	+0.1