Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shew_0266 and Shew_0267 are separated by 69 nucleotides Shew_0267 and Shew_0268 are separated by 186 nucleotides Shew_0268 and Shew_0269 are separated by 96 nucleotides
Shew_0266: Shew_0266 - hypothetical protein (RefSeq), at 284,873 to 285,085
_0266
Shew_0267: Shew_0267 - hypothetical protein (RefSeq), at 285,155 to 285,361
_0267
Shew_0268: Shew_0268 - transcriptional antiterminator, Rof (RefSeq), at 285,548 to 285,829
_0268
Shew_0269: Shew_0269 - hypothetical protein (RefSeq), at 285,926 to 286,813
_0269
Position (kb) 285
286 Strain fitness (log2 ratio) -1
0
1
2
3 at 285.085 kb on + strand at 285.607 kb on + strand, within Shew_0268 at 285.731 kb on - strand, within Shew_0268 at 285.746 kb on - strand, within Shew_0268 at 285.765 kb on + strand, within Shew_0268 at 285.829 kb on - strand at 286.022 kb on - strand, within Shew_0269 at 286.249 kb on + strand, within Shew_0269 at 286.347 kb on + strand, within Shew_0269 at 286.624 kb on + strand, within Shew_0269
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 285,085 + +0.2 285,607 + Shew_0268 0.21 -0.8 285,731 - Shew_0268 0.65 +0.5 285,746 - Shew_0268 0.70 +3.2 285,765 + Shew_0268 0.77 -0.1 285,829 - -0.2 286,022 - Shew_0269 0.11 +0.4 286,249 + Shew_0269 0.36 +0.3 286,347 + Shew_0269 0.47 +0.2 286,624 + Shew_0269 0.79 +0.2
Or see this region's nucleotide sequence