Experiment: m.b. Benzethonium chloride 0.008 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_3516 and Dshi_3517 overlap by 4 nucleotides Dshi_3517 and Dshi_3518 are separated by 35 nucleotides
Dshi_3516: Dshi_3516 - chlorophyll synthesis pathway, BchC (RefSeq), at 3,695,777 to 3,696,715
_3516
Dshi_3517: Dshi_3517 - chlorophyllide reductase iron protein subunit X (RefSeq), at 3,696,712 to 3,697,719
_3517
Dshi_3518: Dshi_3518 - chlorophyllide reductase subunit Y (RefSeq), at 3,697,755 to 3,699,359
_3518
Position (kb)
3696
3697
3698 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3
4 at 3695.723 kb on - strand at 3695.830 kb on - strand at 3696.009 kb on + strand, within Dshi_3516 at 3696.084 kb on - strand, within Dshi_3516 at 3696.336 kb on + strand, within Dshi_3516 at 3696.408 kb on - strand, within Dshi_3516 at 3696.492 kb on + strand, within Dshi_3516 at 3696.539 kb on + strand, within Dshi_3516 at 3696.575 kb on - strand, within Dshi_3516 at 3696.629 kb on - strand at 3696.785 kb on + strand at 3696.793 kb on - strand at 3696.827 kb on - strand, within Dshi_3517 at 3696.870 kb on - strand, within Dshi_3517 at 3696.972 kb on + strand, within Dshi_3517 at 3697.070 kb on + strand, within Dshi_3517 at 3697.214 kb on - strand, within Dshi_3517 at 3697.239 kb on + strand, within Dshi_3517 at 3697.239 kb on + strand, within Dshi_3517 at 3697.267 kb on + strand, within Dshi_3517 at 3697.279 kb on - strand, within Dshi_3517 at 3697.305 kb on + strand, within Dshi_3517 at 3697.385 kb on + strand, within Dshi_3517 at 3697.393 kb on - strand, within Dshi_3517 at 3697.404 kb on - strand, within Dshi_3517 at 3697.451 kb on + strand, within Dshi_3517 at 3697.459 kb on - strand, within Dshi_3517 at 3697.533 kb on + strand, within Dshi_3517 at 3697.541 kb on - strand, within Dshi_3517 at 3697.541 kb on - strand, within Dshi_3517 at 3697.674 kb on + strand at 3697.729 kb on + strand at 3697.737 kb on - strand at 3697.788 kb on - strand at 3697.851 kb on - strand at 3697.927 kb on + strand, within Dshi_3518 at 3697.999 kb on + strand, within Dshi_3518 at 3698.075 kb on - strand, within Dshi_3518 at 3698.096 kb on - strand, within Dshi_3518 at 3698.142 kb on + strand, within Dshi_3518 at 3698.186 kb on + strand, within Dshi_3518 at 3698.218 kb on - strand, within Dshi_3518 at 3698.257 kb on - strand, within Dshi_3518 at 3698.265 kb on + strand, within Dshi_3518 at 3698.273 kb on - strand, within Dshi_3518 at 3698.274 kb on + strand, within Dshi_3518 at 3698.335 kb on - strand, within Dshi_3518 at 3698.478 kb on + strand, within Dshi_3518 at 3698.486 kb on + strand, within Dshi_3518 at 3698.491 kb on + strand, within Dshi_3518 at 3698.501 kb on + strand, within Dshi_3518 at 3698.501 kb on + strand, within Dshi_3518 at 3698.560 kb on + strand, within Dshi_3518 at 3698.594 kb on - strand, within Dshi_3518 at 3698.624 kb on - strand, within Dshi_3518 at 3698.653 kb on - strand, within Dshi_3518 at 3698.690 kb on - strand, within Dshi_3518
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Benzethonium chloride 0.008 mM remove 3,695,723 - -1.2 3,695,830 - +0.2 3,696,009 + Dshi_3516 0.25 +1.0 3,696,084 - Dshi_3516 0.33 +0.8 3,696,336 + Dshi_3516 0.60 +1.1 3,696,408 - Dshi_3516 0.67 -0.2 3,696,492 + Dshi_3516 0.76 +1.2 3,696,539 + Dshi_3516 0.81 +0.3 3,696,575 - Dshi_3516 0.85 +1.5 3,696,629 - +0.4 3,696,785 + -2.1 3,696,793 - -1.1 3,696,827 - Dshi_3517 0.11 -0.4 3,696,870 - Dshi_3517 0.16 +0.4 3,696,972 + Dshi_3517 0.26 +1.7 3,697,070 + Dshi_3517 0.36 -0.2 3,697,214 - Dshi_3517 0.50 -1.7 3,697,239 + Dshi_3517 0.52 +0.4 3,697,239 + Dshi_3517 0.52 +1.2 3,697,267 + Dshi_3517 0.55 +2.1 3,697,279 - Dshi_3517 0.56 -0.7 3,697,305 + Dshi_3517 0.59 -1.7 3,697,385 + Dshi_3517 0.67 +0.3 3,697,393 - Dshi_3517 0.68 +0.9 3,697,404 - Dshi_3517 0.69 +1.8 3,697,451 + Dshi_3517 0.73 +1.4 3,697,459 - Dshi_3517 0.74 +3.4 3,697,533 + Dshi_3517 0.81 +1.1 3,697,541 - Dshi_3517 0.82 +0.2 3,697,541 - Dshi_3517 0.82 +1.7 3,697,674 + +1.7 3,697,729 + +1.3 3,697,737 - +1.7 3,697,788 - -0.4 3,697,851 - -1.5 3,697,927 + Dshi_3518 0.11 +3.1 3,697,999 + Dshi_3518 0.15 +1.0 3,698,075 - Dshi_3518 0.20 +0.0 3,698,096 - Dshi_3518 0.21 +1.6 3,698,142 + Dshi_3518 0.24 +1.7 3,698,186 + Dshi_3518 0.27 +1.3 3,698,218 - Dshi_3518 0.29 -1.3 3,698,257 - Dshi_3518 0.31 +1.9 3,698,265 + Dshi_3518 0.32 +1.3 3,698,273 - Dshi_3518 0.32 +1.7 3,698,274 + Dshi_3518 0.32 +4.7 3,698,335 - Dshi_3518 0.36 +0.2 3,698,478 + Dshi_3518 0.45 +0.3 3,698,486 + Dshi_3518 0.46 -0.8 3,698,491 + Dshi_3518 0.46 +1.4 3,698,501 + Dshi_3518 0.46 +0.9 3,698,501 + Dshi_3518 0.46 +3.6 3,698,560 + Dshi_3518 0.50 +0.1 3,698,594 - Dshi_3518 0.52 +2.8 3,698,624 - Dshi_3518 0.54 +0.5 3,698,653 - Dshi_3518 0.56 -4.1 3,698,690 - Dshi_3518 0.58 +1.4
Or see this region's nucleotide sequence