Experiment: m.b. Benzethonium chloride 0.008 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_3513 and Dshi_3514 are separated by 98 nucleotides Dshi_3514 and Dshi_3515 are separated by 3 nucleotides Dshi_3515 and Dshi_3516 are separated by 123 nucleotides
Dshi_3513: Dshi_3513 - Zeta-phytoene desaturase (RefSeq), at 3,691,944 to 3,693,542
_3513
Dshi_3514: Dshi_3514 - Polyprenyl synthetase (RefSeq), at 3,693,641 to 3,694,519
_3514
Dshi_3515: Dshi_3515 - O-methyltransferase family 2 (RefSeq), at 3,694,523 to 3,695,653
_3515
Dshi_3516: Dshi_3516 - chlorophyll synthesis pathway, BchC (RefSeq), at 3,695,777 to 3,696,715
_3516
Position (kb)
3694
3695
3696 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 3693.579 kb on + strand at 3693.637 kb on + strand at 3693.680 kb on + strand at 3693.729 kb on - strand, within Dshi_3514 at 3693.748 kb on + strand, within Dshi_3514 at 3693.756 kb on - strand, within Dshi_3514 at 3693.799 kb on - strand, within Dshi_3514 at 3693.827 kb on + strand, within Dshi_3514 at 3693.831 kb on - strand, within Dshi_3514 at 3693.899 kb on - strand, within Dshi_3514 at 3693.942 kb on + strand, within Dshi_3514 at 3693.950 kb on - strand, within Dshi_3514 at 3693.950 kb on - strand, within Dshi_3514 at 3693.959 kb on + strand, within Dshi_3514 at 3693.985 kb on - strand, within Dshi_3514 at 3694.008 kb on - strand, within Dshi_3514 at 3694.100 kb on + strand, within Dshi_3514 at 3694.133 kb on + strand, within Dshi_3514 at 3694.141 kb on - strand, within Dshi_3514 at 3694.145 kb on - strand, within Dshi_3514 at 3694.170 kb on - strand, within Dshi_3514 at 3694.188 kb on - strand, within Dshi_3514 at 3694.463 kb on + strand at 3694.488 kb on + strand at 3694.632 kb on - strand at 3694.745 kb on - strand, within Dshi_3515 at 3694.811 kb on - strand, within Dshi_3515 at 3694.839 kb on - strand, within Dshi_3515 at 3694.858 kb on + strand, within Dshi_3515 at 3694.931 kb on + strand, within Dshi_3515 at 3695.077 kb on + strand, within Dshi_3515 at 3695.265 kb on - strand, within Dshi_3515 at 3695.316 kb on + strand, within Dshi_3515 at 3695.326 kb on + strand, within Dshi_3515 at 3695.326 kb on + strand, within Dshi_3515 at 3695.326 kb on + strand, within Dshi_3515 at 3695.334 kb on - strand, within Dshi_3515 at 3695.334 kb on - strand, within Dshi_3515 at 3695.334 kb on - strand, within Dshi_3515 at 3695.395 kb on - strand, within Dshi_3515 at 3695.425 kb on - strand, within Dshi_3515 at 3695.723 kb on - strand at 3695.830 kb on - strand at 3696.009 kb on + strand, within Dshi_3516 at 3696.084 kb on - strand, within Dshi_3516 at 3696.336 kb on + strand, within Dshi_3516 at 3696.408 kb on - strand, within Dshi_3516 at 3696.492 kb on + strand, within Dshi_3516 at 3696.539 kb on + strand, within Dshi_3516 at 3696.575 kb on - strand, within Dshi_3516 at 3696.629 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Benzethonium chloride 0.008 mM remove 3,693,579 + -1.1 3,693,637 + -2.1 3,693,680 + -1.7 3,693,729 - Dshi_3514 0.10 -0.1 3,693,748 + Dshi_3514 0.12 -0.1 3,693,756 - Dshi_3514 0.13 +0.7 3,693,799 - Dshi_3514 0.18 +1.9 3,693,827 + Dshi_3514 0.21 -0.6 3,693,831 - Dshi_3514 0.22 -3.1 3,693,899 - Dshi_3514 0.29 -0.4 3,693,942 + Dshi_3514 0.34 +0.8 3,693,950 - Dshi_3514 0.35 -0.4 3,693,950 - Dshi_3514 0.35 +0.2 3,693,959 + Dshi_3514 0.36 -0.6 3,693,985 - Dshi_3514 0.39 +1.1 3,694,008 - Dshi_3514 0.42 +1.5 3,694,100 + Dshi_3514 0.52 +0.8 3,694,133 + Dshi_3514 0.56 -0.6 3,694,141 - Dshi_3514 0.57 -1.8 3,694,145 - Dshi_3514 0.57 +2.9 3,694,170 - Dshi_3514 0.60 -2.1 3,694,188 - Dshi_3514 0.62 +2.1 3,694,463 + -2.3 3,694,488 + -0.1 3,694,632 - +0.3 3,694,745 - Dshi_3515 0.20 -1.5 3,694,811 - Dshi_3515 0.25 -1.0 3,694,839 - Dshi_3515 0.28 -2.4 3,694,858 + Dshi_3515 0.30 -0.3 3,694,931 + Dshi_3515 0.36 -0.5 3,695,077 + Dshi_3515 0.49 +0.0 3,695,265 - Dshi_3515 0.66 +0.5 3,695,316 + Dshi_3515 0.70 -0.1 3,695,326 + Dshi_3515 0.71 -1.5 3,695,326 + Dshi_3515 0.71 -2.1 3,695,326 + Dshi_3515 0.71 -0.8 3,695,334 - Dshi_3515 0.72 -0.7 3,695,334 - Dshi_3515 0.72 -0.7 3,695,334 - Dshi_3515 0.72 -2.1 3,695,395 - Dshi_3515 0.77 -0.1 3,695,425 - Dshi_3515 0.80 -0.6 3,695,723 - -1.2 3,695,830 - +0.2 3,696,009 + Dshi_3516 0.25 +1.0 3,696,084 - Dshi_3516 0.33 +0.8 3,696,336 + Dshi_3516 0.60 +1.1 3,696,408 - Dshi_3516 0.67 -0.2 3,696,492 + Dshi_3516 0.76 +1.2 3,696,539 + Dshi_3516 0.81 +0.3 3,696,575 - Dshi_3516 0.85 +1.5 3,696,629 - +0.4
Or see this region's nucleotide sequence