Experiment: m.b. Benzethonium chloride 0.008 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_3273 and Dshi_3274 are separated by 93 nucleotides Dshi_3274 and Dshi_3275 are separated by 167 nucleotides
Dshi_3273: Dshi_3273 - lipid A biosynthesis acyltransferase (RefSeq), at 3,437,544 to 3,438,491
_3273
Dshi_3274: Dshi_3274 - TPR repeat-containing protein (RefSeq), at 3,438,585 to 3,439,571
_3274
Dshi_3275: Dshi_3275 - Chorismate synthase (RefSeq), at 3,439,739 to 3,440,842
_3275
Position (kb)
3438
3439
3440 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3437.630 kb on + strand at 3437.663 kb on - strand, within Dshi_3273 at 3437.684 kb on - strand, within Dshi_3273 at 3437.738 kb on - strand, within Dshi_3273 at 3437.766 kb on - strand, within Dshi_3273 at 3437.825 kb on + strand, within Dshi_3273 at 3437.839 kb on + strand, within Dshi_3273 at 3437.883 kb on - strand, within Dshi_3273 at 3437.899 kb on - strand, within Dshi_3273 at 3437.923 kb on + strand, within Dshi_3273 at 3437.993 kb on - strand, within Dshi_3273 at 3438.228 kb on + strand, within Dshi_3273 at 3438.323 kb on - strand, within Dshi_3273 at 3438.358 kb on - strand, within Dshi_3273 at 3438.398 kb on - strand at 3438.398 kb on - strand at 3438.398 kb on - strand at 3438.445 kb on - strand at 3438.455 kb on + strand at 3438.458 kb on - strand at 3438.514 kb on - strand at 3438.543 kb on + strand at 3438.548 kb on - strand at 3438.556 kb on + strand at 3438.564 kb on - strand at 3438.658 kb on - strand at 3438.693 kb on - strand, within Dshi_3274 at 3438.699 kb on + strand, within Dshi_3274 at 3438.777 kb on - strand, within Dshi_3274 at 3438.825 kb on - strand, within Dshi_3274 at 3438.877 kb on + strand, within Dshi_3274 at 3438.881 kb on - strand, within Dshi_3274 at 3439.043 kb on + strand, within Dshi_3274 at 3439.052 kb on - strand, within Dshi_3274 at 3439.079 kb on - strand, within Dshi_3274 at 3439.235 kb on - strand, within Dshi_3274 at 3439.388 kb on + strand, within Dshi_3274 at 3439.464 kb on - strand, within Dshi_3274 at 3439.550 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Benzethonium chloride 0.008 mM remove 3,437,630 + +0.0 3,437,663 - Dshi_3273 0.13 +0.0 3,437,684 - Dshi_3273 0.15 -2.2 3,437,738 - Dshi_3273 0.20 +1.3 3,437,766 - Dshi_3273 0.23 +1.0 3,437,825 + Dshi_3273 0.30 +0.8 3,437,839 + Dshi_3273 0.31 +1.3 3,437,883 - Dshi_3273 0.36 +1.0 3,437,899 - Dshi_3273 0.37 -0.9 3,437,923 + Dshi_3273 0.40 +0.8 3,437,993 - Dshi_3273 0.47 +0.0 3,438,228 + Dshi_3273 0.72 +0.0 3,438,323 - Dshi_3273 0.82 +0.7 3,438,358 - Dshi_3273 0.86 +1.3 3,438,398 - +1.4 3,438,398 - +1.1 3,438,398 - +0.4 3,438,445 - -3.2 3,438,455 + -0.5 3,438,458 - -0.1 3,438,514 - -2.0 3,438,543 + -0.2 3,438,548 - -0.4 3,438,556 + -0.7 3,438,564 - +0.6 3,438,658 - -1.0 3,438,693 - Dshi_3274 0.11 +0.5 3,438,699 + Dshi_3274 0.12 +1.5 3,438,777 - Dshi_3274 0.19 +1.2 3,438,825 - Dshi_3274 0.24 -0.6 3,438,877 + Dshi_3274 0.30 -1.7 3,438,881 - Dshi_3274 0.30 -0.6 3,439,043 + Dshi_3274 0.46 -1.4 3,439,052 - Dshi_3274 0.47 -1.6 3,439,079 - Dshi_3274 0.50 -0.3 3,439,235 - Dshi_3274 0.66 -0.4 3,439,388 + Dshi_3274 0.81 -2.3 3,439,464 - Dshi_3274 0.89 -0.6 3,439,550 + -0.6
Or see this region's nucleotide sequence