Experiment: m.b. Benzethonium chloride 0.008 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_3037 and Dshi_3038 are separated by 116 nucleotides Dshi_3038 and Dshi_3039 are separated by 3 nucleotides Dshi_3039 and Dshi_3040 are separated by 118 nucleotides
Dshi_3037: Dshi_3037 - efflux transporter, RND family, MFP subunit (RefSeq), at 3,206,616 to 3,207,824
_3037
Dshi_3038: Dshi_3038 - transcriptional regulator, TetR family (RefSeq), at 3,207,941 to 3,208,633
_3038
Dshi_3039: Dshi_3039 - BLUF domain protein (RefSeq), at 3,208,637 to 3,209,044
_3039
Dshi_3040: Dshi_3040 - Dihydrodipicolinate reductase (RefSeq), at 3,209,163 to 3,209,972
_3040
Position (kb)
3208
3209
3210 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 3207.784 kb on + strand at 3207.804 kb on - strand at 3207.999 kb on - strand at 3208.083 kb on + strand, within Dshi_3038 at 3208.167 kb on - strand, within Dshi_3038 at 3208.198 kb on + strand, within Dshi_3038 at 3208.206 kb on - strand, within Dshi_3038 at 3208.227 kb on + strand, within Dshi_3038 at 3208.271 kb on - strand, within Dshi_3038 at 3208.401 kb on + strand, within Dshi_3038 at 3208.433 kb on + strand, within Dshi_3038 at 3208.443 kb on + strand, within Dshi_3038 at 3208.456 kb on - strand, within Dshi_3038 at 3208.526 kb on - strand, within Dshi_3038 at 3208.627 kb on + strand at 3208.833 kb on - strand, within Dshi_3039 at 3208.905 kb on - strand, within Dshi_3039 at 3208.946 kb on - strand, within Dshi_3039 at 3208.980 kb on + strand, within Dshi_3039 at 3209.035 kb on - strand at 3209.103 kb on - strand at 3209.990 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Benzethonium chloride 0.008 mM remove 3,207,784 + -1.1 3,207,804 - +1.2 3,207,999 - +0.0 3,208,083 + Dshi_3038 0.20 +0.0 3,208,167 - Dshi_3038 0.33 -2.6 3,208,198 + Dshi_3038 0.37 -2.4 3,208,206 - Dshi_3038 0.38 -3.1 3,208,227 + Dshi_3038 0.41 -1.9 3,208,271 - Dshi_3038 0.48 -0.6 3,208,401 + Dshi_3038 0.66 -1.8 3,208,433 + Dshi_3038 0.71 -0.8 3,208,443 + Dshi_3038 0.72 +0.2 3,208,456 - Dshi_3038 0.74 +0.2 3,208,526 - Dshi_3038 0.84 -3.8 3,208,627 + +0.3 3,208,833 - Dshi_3039 0.48 -0.1 3,208,905 - Dshi_3039 0.66 +0.5 3,208,946 - Dshi_3039 0.76 -2.4 3,208,980 + Dshi_3039 0.84 +2.4 3,209,035 - +0.2 3,209,103 - -0.1 3,209,990 - +0.6
Or see this region's nucleotide sequence