Experiment: m.b. Benzethonium chloride 0.008 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_2757 and Dshi_2758 are separated by 101 nucleotides Dshi_2758 and Dshi_2759 overlap by 4 nucleotides
Dshi_2757: Dshi_2757 - Alkanesulfonate monooxygenase (RefSeq), at 2,918,302 to 2,919,456
_2757
Dshi_2758: Dshi_2758 - transcriptional regulator, GntR family (RefSeq), at 2,919,558 to 2,920,268
_2758
Dshi_2759: Dshi_2759 - oxidoreductase domain protein (RefSeq), at 2,920,265 to 2,921,386
_2759
Position (kb)
2919
2920
2921 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2918.558 kb on + strand, within Dshi_2757 at 2918.724 kb on - strand, within Dshi_2757 at 2918.802 kb on - strand, within Dshi_2757 at 2918.914 kb on - strand, within Dshi_2757 at 2918.960 kb on + strand, within Dshi_2757 at 2918.968 kb on - strand, within Dshi_2757 at 2919.000 kb on + strand, within Dshi_2757 at 2919.013 kb on - strand, within Dshi_2757 at 2919.015 kb on + strand, within Dshi_2757 at 2919.070 kb on + strand, within Dshi_2757 at 2919.148 kb on - strand, within Dshi_2757 at 2919.269 kb on - strand, within Dshi_2757 at 2919.282 kb on - strand, within Dshi_2757 at 2919.326 kb on - strand, within Dshi_2757 at 2919.410 kb on - strand at 2919.419 kb on - strand at 2919.491 kb on + strand at 2919.550 kb on - strand at 2919.558 kb on + strand at 2919.578 kb on + strand at 2919.632 kb on - strand, within Dshi_2758 at 2919.665 kb on + strand, within Dshi_2758 at 2919.722 kb on + strand, within Dshi_2758 at 2919.729 kb on + strand, within Dshi_2758 at 2919.750 kb on + strand, within Dshi_2758 at 2919.797 kb on + strand, within Dshi_2758 at 2919.805 kb on - strand, within Dshi_2758 at 2919.934 kb on - strand, within Dshi_2758 at 2920.082 kb on - strand, within Dshi_2758 at 2920.255 kb on + strand at 2920.337 kb on - strand at 2920.374 kb on - strand at 2920.546 kb on - strand, within Dshi_2759 at 2920.622 kb on - strand, within Dshi_2759 at 2920.624 kb on + strand, within Dshi_2759 at 2920.689 kb on - strand, within Dshi_2759 at 2920.825 kb on + strand, within Dshi_2759 at 2920.880 kb on + strand, within Dshi_2759 at 2920.892 kb on + strand, within Dshi_2759 at 2920.977 kb on + strand, within Dshi_2759 at 2920.985 kb on - strand, within Dshi_2759 at 2921.245 kb on + strand, within Dshi_2759 at 2921.245 kb on + strand, within Dshi_2759 at 2921.245 kb on + strand, within Dshi_2759 at 2921.245 kb on + strand, within Dshi_2759 at 2921.253 kb on - strand, within Dshi_2759 at 2921.253 kb on - strand, within Dshi_2759 at 2921.265 kb on + strand, within Dshi_2759
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Benzethonium chloride 0.008 mM remove 2,918,558 + Dshi_2757 0.22 -0.5 2,918,724 - Dshi_2757 0.37 -3.5 2,918,802 - Dshi_2757 0.43 +0.2 2,918,914 - Dshi_2757 0.53 +1.2 2,918,960 + Dshi_2757 0.57 +1.4 2,918,968 - Dshi_2757 0.58 +0.5 2,919,000 + Dshi_2757 0.60 +0.3 2,919,013 - Dshi_2757 0.62 +1.0 2,919,015 + Dshi_2757 0.62 -1.2 2,919,070 + Dshi_2757 0.66 +0.7 2,919,148 - Dshi_2757 0.73 -0.0 2,919,269 - Dshi_2757 0.84 +1.0 2,919,282 - Dshi_2757 0.85 -0.1 2,919,326 - Dshi_2757 0.89 -0.5 2,919,410 - +0.8 2,919,419 - -2.7 2,919,491 + -3.0 2,919,550 - +0.3 2,919,558 + -0.2 2,919,578 + -0.1 2,919,632 - Dshi_2758 0.10 -0.7 2,919,665 + Dshi_2758 0.15 -1.2 2,919,722 + Dshi_2758 0.23 +1.0 2,919,729 + Dshi_2758 0.24 +1.6 2,919,750 + Dshi_2758 0.27 +0.4 2,919,797 + Dshi_2758 0.34 +0.4 2,919,805 - Dshi_2758 0.35 -1.8 2,919,934 - Dshi_2758 0.53 +0.4 2,920,082 - Dshi_2758 0.74 +1.3 2,920,255 + +0.8 2,920,337 - -1.3 2,920,374 - -0.4 2,920,546 - Dshi_2759 0.25 -0.2 2,920,622 - Dshi_2759 0.32 -0.1 2,920,624 + Dshi_2759 0.32 -0.2 2,920,689 - Dshi_2759 0.38 +0.1 2,920,825 + Dshi_2759 0.50 -0.0 2,920,880 + Dshi_2759 0.55 -3.1 2,920,892 + Dshi_2759 0.56 +1.1 2,920,977 + Dshi_2759 0.63 +0.9 2,920,985 - Dshi_2759 0.64 +0.2 2,921,245 + Dshi_2759 0.87 -0.0 2,921,245 + Dshi_2759 0.87 +0.1 2,921,245 + Dshi_2759 0.87 -3.3 2,921,245 + Dshi_2759 0.87 +0.7 2,921,253 - Dshi_2759 0.88 +1.0 2,921,253 - Dshi_2759 0.88 +0.6 2,921,265 + Dshi_2759 0.89 +0.5
Or see this region's nucleotide sequence