Experiment: m.b. Benzethonium chloride 0.008 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_2571 and Dshi_2572 are separated by 43 nucleotides Dshi_2572 and Dshi_2573 are separated by 106 nucleotides Dshi_2573 and Dshi_2574 are separated by 270 nucleotides Dshi_2574 and Dshi_2575 are separated by 88 nucleotides
Dshi_2571: Dshi_2571 - RNA methyltransferase, TrmH family, group 3 (RefSeq), at 2,738,741 to 2,739,532
_2571
Dshi_2572: Dshi_2572 - hypothetical protein (RefSeq), at 2,739,576 to 2,739,908
_2572
Dshi_2573: Dshi_2573 - hypothetical protein (RefSeq), at 2,740,015 to 2,740,470
_2573
Dshi_2574: Dshi_2574 - CoA-binding domain protein (RefSeq), at 2,740,741 to 2,741,226
_2574
Dshi_2575: Dshi_2575 - phosphoribosyl-ATP pyrophosphohydrolase (RefSeq), at 2,741,315 to 2,741,623
_2575
Position (kb)
2740
2741 Strain fitness (log2 ratio)
-2
-1
0
1 at 2739.025 kb on + strand, within Dshi_2571 at 2739.055 kb on + strand, within Dshi_2571 at 2739.058 kb on - strand, within Dshi_2571 at 2739.216 kb on - strand, within Dshi_2571 at 2739.284 kb on - strand, within Dshi_2571 at 2739.342 kb on + strand, within Dshi_2571 at 2739.520 kb on + strand at 2739.536 kb on - strand at 2739.568 kb on - strand at 2739.640 kb on - strand, within Dshi_2572 at 2739.647 kb on + strand, within Dshi_2572 at 2739.660 kb on - strand, within Dshi_2572 at 2739.660 kb on - strand, within Dshi_2572 at 2739.761 kb on - strand, within Dshi_2572 at 2739.775 kb on + strand, within Dshi_2572 at 2739.783 kb on - strand, within Dshi_2572 at 2739.783 kb on - strand, within Dshi_2572 at 2739.798 kb on + strand, within Dshi_2572 at 2739.885 kb on - strand at 2740.040 kb on - strand at 2740.078 kb on + strand, within Dshi_2573 at 2740.087 kb on - strand, within Dshi_2573 at 2740.136 kb on + strand, within Dshi_2573 at 2740.162 kb on - strand, within Dshi_2573 at 2740.182 kb on - strand, within Dshi_2573 at 2740.247 kb on - strand, within Dshi_2573 at 2740.264 kb on + strand, within Dshi_2573 at 2740.264 kb on + strand, within Dshi_2573 at 2740.277 kb on - strand, within Dshi_2573 at 2740.299 kb on + strand, within Dshi_2573 at 2740.325 kb on - strand, within Dshi_2573 at 2740.425 kb on - strand at 2740.459 kb on + strand at 2740.459 kb on + strand at 2740.467 kb on - strand at 2740.478 kb on + strand at 2740.478 kb on + strand at 2740.486 kb on - strand at 2740.502 kb on + strand at 2740.554 kb on - strand at 2740.607 kb on + strand at 2740.683 kb on - strand at 2740.815 kb on - strand, within Dshi_2574 at 2741.201 kb on - strand at 2741.213 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Benzethonium chloride 0.008 mM remove 2,739,025 + Dshi_2571 0.36 -1.1 2,739,055 + Dshi_2571 0.40 +0.6 2,739,058 - Dshi_2571 0.40 -0.5 2,739,216 - Dshi_2571 0.60 -0.1 2,739,284 - Dshi_2571 0.69 -1.8 2,739,342 + Dshi_2571 0.76 -2.3 2,739,520 + -1.0 2,739,536 - +0.9 2,739,568 - +0.6 2,739,640 - Dshi_2572 0.19 +0.8 2,739,647 + Dshi_2572 0.21 +1.7 2,739,660 - Dshi_2572 0.25 +0.5 2,739,660 - Dshi_2572 0.25 +0.0 2,739,761 - Dshi_2572 0.56 -1.6 2,739,775 + Dshi_2572 0.60 -0.4 2,739,783 - Dshi_2572 0.62 +0.4 2,739,783 - Dshi_2572 0.62 -2.6 2,739,798 + Dshi_2572 0.67 -1.0 2,739,885 - -0.1 2,740,040 - +0.3 2,740,078 + Dshi_2573 0.14 -1.6 2,740,087 - Dshi_2573 0.16 -2.2 2,740,136 + Dshi_2573 0.27 -0.2 2,740,162 - Dshi_2573 0.32 -0.4 2,740,182 - Dshi_2573 0.37 -0.3 2,740,247 - Dshi_2573 0.51 +0.6 2,740,264 + Dshi_2573 0.55 +0.2 2,740,264 + Dshi_2573 0.55 +0.1 2,740,277 - Dshi_2573 0.57 +0.0 2,740,299 + Dshi_2573 0.62 -0.9 2,740,325 - Dshi_2573 0.68 -1.9 2,740,425 - +0.1 2,740,459 + -0.9 2,740,459 + +0.0 2,740,467 - +0.0 2,740,478 + +0.0 2,740,478 + +0.5 2,740,486 - +0.0 2,740,502 + -0.6 2,740,554 - -0.2 2,740,607 + -0.3 2,740,683 - -0.2 2,740,815 - Dshi_2574 0.15 -0.9 2,741,201 - +0.0 2,741,213 + +1.0
Or see this region's nucleotide sequence