Experiment: m.b. Benzethonium chloride 0.008 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_2011 and Dshi_2012 overlap by 1 nucleotides Dshi_2012 and Dshi_2013 overlap by 4 nucleotides Dshi_2013 and Dshi_2014 are separated by 76 nucleotides
Dshi_2011: Dshi_2011 - phosphonate ABC transporter, inner membrane subunit (RefSeq), at 2,130,480 to 2,131,292
_2011
Dshi_2012: Dshi_2012 - phosphonate ABC transporter, inner membrane subunit (RefSeq), at 2,131,292 to 2,132,107
_2012
Dshi_2013: Dshi_2013 - Haloacid dehalogenase domain protein hydrolase (RefSeq), at 2,132,104 to 2,133,009
_2013
Dshi_2014: Dshi_2014 - extracellular solute-binding protein family 1 (RefSeq), at 2,133,086 to 2,134,387
_2014
Position (kb)
2132
2133
2134 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2131.178 kb on - strand, within Dshi_2011 at 2131.308 kb on + strand at 2131.413 kb on + strand, within Dshi_2012 at 2132.179 kb on - strand at 2132.313 kb on + strand, within Dshi_2013 at 2132.486 kb on - strand, within Dshi_2013 at 2132.585 kb on - strand, within Dshi_2013 at 2132.728 kb on - strand, within Dshi_2013 at 2132.745 kb on - strand, within Dshi_2013 at 2132.749 kb on - strand, within Dshi_2013 at 2132.785 kb on + strand, within Dshi_2013 at 2132.828 kb on - strand, within Dshi_2013 at 2132.892 kb on + strand, within Dshi_2013 at 2132.892 kb on + strand, within Dshi_2013 at 2132.902 kb on - strand, within Dshi_2013 at 2132.911 kb on + strand, within Dshi_2013 at 2132.931 kb on - strand at 2132.955 kb on + strand at 2133.042 kb on + strand at 2133.130 kb on - strand at 2133.310 kb on + strand, within Dshi_2014 at 2133.452 kb on + strand, within Dshi_2014 at 2133.464 kb on - strand, within Dshi_2014 at 2133.596 kb on + strand, within Dshi_2014 at 2133.647 kb on - strand, within Dshi_2014 at 2133.688 kb on - strand, within Dshi_2014 at 2133.704 kb on + strand, within Dshi_2014 at 2133.745 kb on - strand, within Dshi_2014 at 2133.753 kb on + strand, within Dshi_2014 at 2133.771 kb on - strand, within Dshi_2014 at 2133.780 kb on - strand, within Dshi_2014 at 2133.932 kb on + strand, within Dshi_2014 at 2133.985 kb on + strand, within Dshi_2014
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Benzethonium chloride 0.008 mM remove 2,131,178 - Dshi_2011 0.86 -2.0 2,131,308 + -0.5 2,131,413 + Dshi_2012 0.15 -0.3 2,132,179 - -1.0 2,132,313 + Dshi_2013 0.23 +1.5 2,132,486 - Dshi_2013 0.42 +1.9 2,132,585 - Dshi_2013 0.53 +0.2 2,132,728 - Dshi_2013 0.69 +1.4 2,132,745 - Dshi_2013 0.71 +0.4 2,132,749 - Dshi_2013 0.71 -0.7 2,132,785 + Dshi_2013 0.75 +2.2 2,132,828 - Dshi_2013 0.80 -0.1 2,132,892 + Dshi_2013 0.87 -0.0 2,132,892 + Dshi_2013 0.87 +0.0 2,132,902 - Dshi_2013 0.88 +1.0 2,132,911 + Dshi_2013 0.89 +0.0 2,132,931 - -0.2 2,132,955 + -0.4 2,133,042 + +1.2 2,133,130 - +0.4 2,133,310 + Dshi_2014 0.17 +0.7 2,133,452 + Dshi_2014 0.28 -2.0 2,133,464 - Dshi_2014 0.29 +0.2 2,133,596 + Dshi_2014 0.39 -0.7 2,133,647 - Dshi_2014 0.43 +0.4 2,133,688 - Dshi_2014 0.46 +0.6 2,133,704 + Dshi_2014 0.47 +0.8 2,133,745 - Dshi_2014 0.51 -0.7 2,133,753 + Dshi_2014 0.51 +0.9 2,133,771 - Dshi_2014 0.53 +0.3 2,133,780 - Dshi_2014 0.53 -0.1 2,133,932 + Dshi_2014 0.65 -0.7 2,133,985 + Dshi_2014 0.69 +0.1
Or see this region's nucleotide sequence