Experiment: m.b. Benzethonium chloride 0.008 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_1977 and Dshi_1978 are separated by 16 nucleotides Dshi_1978 and Dshi_1979 overlap by 4 nucleotides Dshi_1979 and Dshi_1980 overlap by 4 nucleotides
Dshi_1977: Dshi_1977 - Extracellular ligand-binding receptor (RefSeq), at 2,090,945 to 2,092,207
_1977
Dshi_1978: Dshi_1978 - inner-membrane translocator (RefSeq), at 2,092,224 to 2,093,177
_1978
Dshi_1979: Dshi_1979 - inner-membrane translocator (RefSeq), at 2,093,174 to 2,094,091
_1979
Dshi_1980: Dshi_1980 - ABC transporter related (RefSeq), at 2,094,088 to 2,094,810
_1980
Position (kb)
2092
2093
2094 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2091.305 kb on + strand, within Dshi_1977 at 2091.311 kb on - strand, within Dshi_1977 at 2091.311 kb on - strand, within Dshi_1977 at 2091.321 kb on - strand, within Dshi_1977 at 2091.343 kb on - strand, within Dshi_1977 at 2091.387 kb on - strand, within Dshi_1977 at 2091.569 kb on + strand, within Dshi_1977 at 2091.632 kb on - strand, within Dshi_1977 at 2091.696 kb on + strand, within Dshi_1977 at 2091.778 kb on - strand, within Dshi_1977 at 2091.814 kb on + strand, within Dshi_1977 at 2091.891 kb on + strand, within Dshi_1977 at 2092.012 kb on + strand, within Dshi_1977 at 2092.071 kb on + strand, within Dshi_1977 at 2092.079 kb on - strand, within Dshi_1977 at 2092.128 kb on + strand at 2092.243 kb on + strand at 2092.267 kb on + strand at 2092.274 kb on + strand at 2092.275 kb on - strand at 2092.345 kb on - strand, within Dshi_1978 at 2092.379 kb on + strand, within Dshi_1978 at 2092.471 kb on + strand, within Dshi_1978 at 2092.539 kb on + strand, within Dshi_1978 at 2092.792 kb on - strand, within Dshi_1978 at 2092.886 kb on + strand, within Dshi_1978 at 2092.969 kb on + strand, within Dshi_1978 at 2093.094 kb on + strand at 2093.108 kb on - strand at 2093.119 kb on - strand at 2093.200 kb on + strand at 2093.269 kb on - strand, within Dshi_1979 at 2093.313 kb on - strand, within Dshi_1979 at 2093.323 kb on - strand, within Dshi_1979 at 2093.323 kb on - strand, within Dshi_1979 at 2093.507 kb on - strand, within Dshi_1979 at 2093.576 kb on + strand, within Dshi_1979 at 2093.584 kb on - strand, within Dshi_1979 at 2093.613 kb on + strand, within Dshi_1979 at 2093.639 kb on + strand, within Dshi_1979 at 2093.685 kb on + strand, within Dshi_1979 at 2093.925 kb on + strand, within Dshi_1979 at 2094.030 kb on - strand at 2094.039 kb on + strand at 2094.132 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Benzethonium chloride 0.008 mM remove 2,091,305 + Dshi_1977 0.29 -0.6 2,091,311 - Dshi_1977 0.29 -0.0 2,091,311 - Dshi_1977 0.29 +0.5 2,091,321 - Dshi_1977 0.30 +0.0 2,091,343 - Dshi_1977 0.32 -3.7 2,091,387 - Dshi_1977 0.35 +0.3 2,091,569 + Dshi_1977 0.49 +0.1 2,091,632 - Dshi_1977 0.54 -1.1 2,091,696 + Dshi_1977 0.59 +0.4 2,091,778 - Dshi_1977 0.66 +0.4 2,091,814 + Dshi_1977 0.69 -0.1 2,091,891 + Dshi_1977 0.75 -1.0 2,092,012 + Dshi_1977 0.84 +0.6 2,092,071 + Dshi_1977 0.89 -0.0 2,092,079 - Dshi_1977 0.90 +0.4 2,092,128 + +0.0 2,092,243 + -1.4 2,092,267 + -0.7 2,092,274 + -1.7 2,092,275 - +0.2 2,092,345 - Dshi_1978 0.13 -1.4 2,092,379 + Dshi_1978 0.16 -1.6 2,092,471 + Dshi_1978 0.26 -0.9 2,092,539 + Dshi_1978 0.33 -0.7 2,092,792 - Dshi_1978 0.60 -0.9 2,092,886 + Dshi_1978 0.69 -0.1 2,092,969 + Dshi_1978 0.78 +0.7 2,093,094 + +2.5 2,093,108 - +0.2 2,093,119 - +0.0 2,093,200 + +0.1 2,093,269 - Dshi_1979 0.10 +0.3 2,093,313 - Dshi_1979 0.15 -1.0 2,093,323 - Dshi_1979 0.16 -0.3 2,093,323 - Dshi_1979 0.16 -1.2 2,093,507 - Dshi_1979 0.36 -1.1 2,093,576 + Dshi_1979 0.44 +0.1 2,093,584 - Dshi_1979 0.45 +1.0 2,093,613 + Dshi_1979 0.48 -0.9 2,093,639 + Dshi_1979 0.51 -3.3 2,093,685 + Dshi_1979 0.56 -1.1 2,093,925 + Dshi_1979 0.82 -0.4 2,094,030 - +1.6 2,094,039 + -0.9 2,094,132 - +0.0
Or see this region's nucleotide sequence