Experiment: m.b. Benzethonium chloride 0.008 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_1784 and Dshi_1785 are separated by 712 nucleotides Dshi_1785 and Dshi_1786 are separated by 692 nucleotides
Dshi_1784: Dshi_1784 - RNA polymerase, sigma-24 subunit, ECF subfamily (RefSeq), at 1,853,035 to 1,853,577
_1784
Dshi_1785: Dshi_1785 - ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent (RefSeq), at 1,854,290 to 1,857,964
_1785
Dshi_1786: Dshi_1786 - hypothetical protein (RefSeq), at 1,858,657 to 1,859,097
_1786
Position (kb)
1854
1855
1856
1857
1858 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 1853.308 kb on - strand, within Dshi_1784 at 1853.560 kb on + strand at 1853.627 kb on - strand at 1853.753 kb on - strand at 1853.783 kb on + strand at 1853.857 kb on - strand at 1853.857 kb on - strand at 1853.968 kb on + strand at 1853.968 kb on + strand at 1853.969 kb on - strand at 1854.173 kb on - strand at 1854.554 kb on + strand at 1854.721 kb on + strand, within Dshi_1785 at 1855.278 kb on - strand, within Dshi_1785 at 1856.052 kb on - strand, within Dshi_1785 at 1856.726 kb on + strand, within Dshi_1785 at 1857.456 kb on + strand, within Dshi_1785 at 1857.482 kb on - strand, within Dshi_1785 at 1858.051 kb on - strand at 1858.065 kb on - strand at 1858.348 kb on + strand at 1858.356 kb on - strand at 1858.356 kb on - strand at 1858.356 kb on - strand at 1858.361 kb on - strand at 1858.361 kb on - strand at 1858.514 kb on + strand at 1858.536 kb on + strand at 1858.536 kb on + strand at 1858.544 kb on - strand at 1858.624 kb on + strand at 1858.659 kb on + strand at 1858.661 kb on + strand at 1858.661 kb on + strand at 1858.679 kb on - strand at 1858.785 kb on + strand, within Dshi_1786 at 1858.800 kb on + strand, within Dshi_1786 at 1858.813 kb on - strand, within Dshi_1786 at 1858.844 kb on + strand, within Dshi_1786 at 1858.863 kb on - strand, within Dshi_1786 at 1858.883 kb on + strand, within Dshi_1786 at 1858.883 kb on + strand, within Dshi_1786
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Benzethonium chloride 0.008 mM remove 1,853,308 - Dshi_1784 0.50 +0.3 1,853,560 + -2.6 1,853,627 - +0.3 1,853,753 - +0.9 1,853,783 + +0.4 1,853,857 - -0.4 1,853,857 - -1.9 1,853,968 + +0.5 1,853,968 + -0.6 1,853,969 - +0.9 1,854,173 - -0.0 1,854,554 + -3.0 1,854,721 + Dshi_1785 0.12 -0.9 1,855,278 - Dshi_1785 0.27 -1.1 1,856,052 - Dshi_1785 0.48 -1.8 1,856,726 + Dshi_1785 0.66 -1.0 1,857,456 + Dshi_1785 0.86 -1.2 1,857,482 - Dshi_1785 0.87 -1.0 1,858,051 - -0.6 1,858,065 - -0.9 1,858,348 + +0.3 1,858,356 - -1.9 1,858,356 - -1.8 1,858,356 - -0.3 1,858,361 - -0.9 1,858,361 - -3.0 1,858,514 + -0.0 1,858,536 + -0.0 1,858,536 + -4.1 1,858,544 - -1.4 1,858,624 + -0.3 1,858,659 + -1.4 1,858,661 + -0.3 1,858,661 + -0.2 1,858,679 - -0.8 1,858,785 + Dshi_1786 0.29 -0.3 1,858,800 + Dshi_1786 0.32 -0.2 1,858,813 - Dshi_1786 0.35 +1.2 1,858,844 + Dshi_1786 0.42 -0.0 1,858,863 - Dshi_1786 0.47 -0.2 1,858,883 + Dshi_1786 0.51 -1.5 1,858,883 + Dshi_1786 0.51 +0.2
Or see this region's nucleotide sequence