Experiment: m.b. Benzethonium chloride 0.008 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_1294 and Dshi_1295 are separated by 127 nucleotides Dshi_1295 and Dshi_1296 are separated by 50 nucleotides Dshi_1296 and Dshi_1297 are separated by 165 nucleotides
Dshi_1294: Dshi_1294 - 4-diphosphocytidyl-2C-methyl-D-erythritol synthase (RefSeq), at 1,347,674 to 1,349,026
_1294
Dshi_1295: Dshi_1295 - HAD-superfamily hydrolase, subfamily IA, variant 3 (RefSeq), at 1,349,154 to 1,349,828
_1295
Dshi_1296: Dshi_1296 - DegT/DnrJ/EryC1/StrS aminotransferase (RefSeq), at 1,349,879 to 1,351,090
_1296
Dshi_1297: Dshi_1297 - acyl-CoA dehydrogenase domain protein (RefSeq), at 1,351,256 to 1,352,419
_1297
Position (kb)
1349
1350
1351
1352 Strain fitness (log2 ratio)
-2
-1
0
1 at 1349.178 kb on - strand at 1349.211 kb on - strand at 1349.226 kb on - strand, within Dshi_1295 at 1349.291 kb on + strand, within Dshi_1295 at 1349.342 kb on + strand, within Dshi_1295 at 1349.358 kb on + strand, within Dshi_1295 at 1349.369 kb on + strand, within Dshi_1295 at 1349.530 kb on + strand, within Dshi_1295 at 1349.543 kb on - strand, within Dshi_1295 at 1349.599 kb on - strand, within Dshi_1295 at 1349.635 kb on - strand, within Dshi_1295 at 1349.712 kb on + strand, within Dshi_1295 at 1349.845 kb on + strand at 1349.913 kb on + strand at 1350.058 kb on + strand, within Dshi_1296 at 1350.392 kb on - strand, within Dshi_1296 at 1350.540 kb on + strand, within Dshi_1296 at 1350.713 kb on + strand, within Dshi_1296 at 1350.713 kb on + strand, within Dshi_1296 at 1350.847 kb on + strand, within Dshi_1296 at 1350.941 kb on + strand, within Dshi_1296 at 1350.949 kb on - strand, within Dshi_1296 at 1350.981 kb on + strand at 1351.192 kb on + strand at 1351.570 kb on + strand, within Dshi_1297 at 1351.575 kb on + strand, within Dshi_1297 at 1351.600 kb on - strand, within Dshi_1297 at 1351.647 kb on - strand, within Dshi_1297 at 1351.774 kb on - strand, within Dshi_1297 at 1351.848 kb on + strand, within Dshi_1297 at 1351.996 kb on - strand, within Dshi_1297 at 1352.049 kb on + strand, within Dshi_1297
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Benzethonium chloride 0.008 mM remove 1,349,178 - +1.5 1,349,211 - +1.4 1,349,226 - Dshi_1295 0.11 +0.7 1,349,291 + Dshi_1295 0.20 -0.8 1,349,342 + Dshi_1295 0.28 +1.4 1,349,358 + Dshi_1295 0.30 +1.7 1,349,369 + Dshi_1295 0.32 -0.2 1,349,530 + Dshi_1295 0.56 -1.8 1,349,543 - Dshi_1295 0.58 +1.3 1,349,599 - Dshi_1295 0.66 +0.9 1,349,635 - Dshi_1295 0.71 -0.4 1,349,712 + Dshi_1295 0.83 +1.5 1,349,845 + +0.3 1,349,913 + -2.5 1,350,058 + Dshi_1296 0.15 -0.9 1,350,392 - Dshi_1296 0.42 -2.0 1,350,540 + Dshi_1296 0.55 -1.4 1,350,713 + Dshi_1296 0.69 -0.3 1,350,713 + Dshi_1296 0.69 +0.3 1,350,847 + Dshi_1296 0.80 -0.1 1,350,941 + Dshi_1296 0.88 -0.6 1,350,949 - Dshi_1296 0.88 -0.6 1,350,981 + -0.4 1,351,192 + -2.5 1,351,570 + Dshi_1297 0.27 +1.2 1,351,575 + Dshi_1297 0.27 -0.6 1,351,600 - Dshi_1297 0.30 +0.8 1,351,647 - Dshi_1297 0.34 -1.0 1,351,774 - Dshi_1297 0.45 +1.5 1,351,848 + Dshi_1297 0.51 +0.4 1,351,996 - Dshi_1297 0.64 +0.0 1,352,049 + Dshi_1297 0.68 +0.0
Or see this region's nucleotide sequence