Experiment: m.b. Benzethonium chloride 0.008 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_1161 and Dshi_1162 are separated by 6 nucleotides Dshi_1162 and Dshi_1163 overlap by 4 nucleotides
Dshi_1161: Dshi_1161 - amidohydrolase (RefSeq), at 1,187,053 to 1,188,213
_1161
Dshi_1162: Dshi_1162 - acriflavin resistance protein (RefSeq), at 1,188,220 to 1,191,789
_1162
Dshi_1163: Dshi_1163 - efflux transporter, RND family, MFP subunit (RefSeq), at 1,191,786 to 1,192,937
_1163
Position (kb)
1188
1189
1190
1191
1192 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1 at 1187.233 kb on + strand, within Dshi_1161 at 1187.487 kb on - strand, within Dshi_1161 at 1187.497 kb on + strand, within Dshi_1161 at 1187.511 kb on + strand, within Dshi_1161 at 1187.712 kb on - strand, within Dshi_1161 at 1187.877 kb on + strand, within Dshi_1161 at 1188.067 kb on + strand, within Dshi_1161 at 1188.093 kb on + strand, within Dshi_1161 at 1188.318 kb on + strand at 1188.547 kb on - strand at 1188.718 kb on - strand, within Dshi_1162 at 1188.771 kb on - strand, within Dshi_1162 at 1188.781 kb on - strand, within Dshi_1162 at 1188.822 kb on + strand, within Dshi_1162 at 1188.883 kb on - strand, within Dshi_1162 at 1188.928 kb on + strand, within Dshi_1162 at 1189.127 kb on + strand, within Dshi_1162 at 1189.136 kb on + strand, within Dshi_1162 at 1189.206 kb on - strand, within Dshi_1162 at 1189.240 kb on - strand, within Dshi_1162 at 1189.435 kb on - strand, within Dshi_1162 at 1189.658 kb on - strand, within Dshi_1162 at 1189.745 kb on + strand, within Dshi_1162 at 1190.046 kb on - strand, within Dshi_1162 at 1190.046 kb on - strand, within Dshi_1162 at 1190.127 kb on + strand, within Dshi_1162 at 1190.744 kb on + strand, within Dshi_1162 at 1190.954 kb on + strand, within Dshi_1162 at 1191.201 kb on + strand, within Dshi_1162 at 1191.223 kb on - strand, within Dshi_1162 at 1191.239 kb on + strand, within Dshi_1162 at 1191.246 kb on - strand, within Dshi_1162 at 1191.482 kb on + strand at 1191.494 kb on - strand at 1191.680 kb on + strand at 1191.691 kb on - strand at 1191.693 kb on + strand at 1191.812 kb on + strand at 1191.816 kb on - strand at 1191.821 kb on - strand at 1191.868 kb on + strand at 1191.876 kb on - strand at 1192.449 kb on - strand, within Dshi_1163 at 1192.627 kb on - strand, within Dshi_1163
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Benzethonium chloride 0.008 mM remove 1,187,233 + Dshi_1161 0.16 +0.8 1,187,487 - Dshi_1161 0.37 -0.2 1,187,497 + Dshi_1161 0.38 -2.3 1,187,511 + Dshi_1161 0.39 +0.4 1,187,712 - Dshi_1161 0.57 -0.8 1,187,877 + Dshi_1161 0.71 -0.0 1,188,067 + Dshi_1161 0.87 -0.9 1,188,093 + Dshi_1161 0.90 -1.1 1,188,318 + -2.5 1,188,547 - -4.8 1,188,718 - Dshi_1162 0.14 -2.3 1,188,771 - Dshi_1162 0.15 -2.3 1,188,781 - Dshi_1162 0.16 -4.7 1,188,822 + Dshi_1162 0.17 -2.8 1,188,883 - Dshi_1162 0.19 -3.3 1,188,928 + Dshi_1162 0.20 -1.5 1,189,127 + Dshi_1162 0.25 -1.0 1,189,136 + Dshi_1162 0.26 -1.0 1,189,206 - Dshi_1162 0.28 -4.0 1,189,240 - Dshi_1162 0.29 -2.8 1,189,435 - Dshi_1162 0.34 -3.5 1,189,658 - Dshi_1162 0.40 -4.0 1,189,745 + Dshi_1162 0.43 -2.8 1,190,046 - Dshi_1162 0.51 -1.5 1,190,046 - Dshi_1162 0.51 -3.9 1,190,127 + Dshi_1162 0.53 -4.3 1,190,744 + Dshi_1162 0.71 -3.1 1,190,954 + Dshi_1162 0.77 -3.4 1,191,201 + Dshi_1162 0.84 -3.9 1,191,223 - Dshi_1162 0.84 -2.0 1,191,239 + Dshi_1162 0.85 -2.0 1,191,246 - Dshi_1162 0.85 -4.0 1,191,482 + -4.9 1,191,494 - -3.4 1,191,680 + -4.5 1,191,691 - -4.0 1,191,693 + -4.4 1,191,812 + -4.7 1,191,816 - -2.5 1,191,821 - -2.5 1,191,868 + -1.5 1,191,876 - -3.7 1,192,449 - Dshi_1163 0.58 -1.5 1,192,627 - Dshi_1163 0.73 -2.8
Or see this region's nucleotide sequence