Experiment: m.b. Benzethonium chloride 0.008 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0120 and Dshi_0121 overlap by 4 nucleotides Dshi_0121 and Dshi_0122 overlap by 4 nucleotides Dshi_0122 and Dshi_0123 are separated by 7 nucleotides
Dshi_0120: Dshi_0120 - GCN5-related N-acetyltransferase (RefSeq), at 118,952 to 119,677
_0120
Dshi_0121: Dshi_0121 - uncharacterized peroxidase-related enzyme (RefSeq), at 119,674 to 120,249
_0121
Dshi_0122: Dshi_0122 - OmpA/MotB domain protein (RefSeq), at 120,246 to 121,178
_0122
Dshi_0123: Dshi_0123 - transcriptional regulator, LysR family (RefSeq), at 121,186 to 122,094
_0123
Position (kb)
120
121
122 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 119.272 kb on - strand, within Dshi_0120 at 119.314 kb on + strand, within Dshi_0120 at 119.395 kb on - strand, within Dshi_0120 at 119.397 kb on + strand, within Dshi_0120 at 119.483 kb on - strand, within Dshi_0120 at 119.625 kb on + strand at 119.692 kb on - strand at 119.772 kb on + strand, within Dshi_0121 at 119.842 kb on + strand, within Dshi_0121 at 119.960 kb on - strand, within Dshi_0121 at 120.103 kb on + strand, within Dshi_0121 at 120.371 kb on + strand, within Dshi_0122 at 120.378 kb on + strand, within Dshi_0122 at 120.386 kb on - strand, within Dshi_0122 at 120.389 kb on + strand, within Dshi_0122 at 120.456 kb on + strand, within Dshi_0122 at 120.669 kb on - strand, within Dshi_0122 at 120.669 kb on - strand, within Dshi_0122 at 120.705 kb on - strand, within Dshi_0122 at 120.705 kb on - strand, within Dshi_0122 at 120.777 kb on + strand, within Dshi_0122 at 120.785 kb on - strand, within Dshi_0122 at 120.815 kb on - strand, within Dshi_0122 at 120.835 kb on + strand, within Dshi_0122 at 120.843 kb on + strand, within Dshi_0122 at 120.845 kb on - strand, within Dshi_0122 at 120.851 kb on - strand, within Dshi_0122 at 120.877 kb on - strand, within Dshi_0122 at 120.945 kb on - strand, within Dshi_0122 at 121.004 kb on - strand, within Dshi_0122 at 121.062 kb on + strand, within Dshi_0122 at 121.167 kb on + strand at 121.180 kb on - strand at 121.180 kb on - strand at 121.187 kb on - strand at 121.250 kb on + strand at 121.304 kb on + strand, within Dshi_0123 at 121.307 kb on - strand, within Dshi_0123 at 121.325 kb on + strand, within Dshi_0123 at 121.326 kb on - strand, within Dshi_0123 at 121.416 kb on - strand, within Dshi_0123 at 121.440 kb on + strand, within Dshi_0123 at 121.487 kb on - strand, within Dshi_0123 at 121.538 kb on - strand, within Dshi_0123 at 121.553 kb on - strand, within Dshi_0123 at 121.588 kb on - strand, within Dshi_0123 at 121.655 kb on - strand, within Dshi_0123 at 121.662 kb on + strand, within Dshi_0123 at 121.701 kb on + strand, within Dshi_0123 at 121.711 kb on + strand, within Dshi_0123 at 121.716 kb on + strand, within Dshi_0123 at 121.777 kb on + strand, within Dshi_0123 at 121.849 kb on - strand, within Dshi_0123 at 121.849 kb on - strand, within Dshi_0123 at 121.856 kb on - strand, within Dshi_0123 at 121.915 kb on - strand, within Dshi_0123 at 121.974 kb on + strand, within Dshi_0123 at 122.049 kb on + strand at 122.058 kb on + strand at 122.102 kb on + strand at 122.103 kb on + strand at 122.103 kb on + strand at 122.109 kb on - strand at 122.112 kb on + strand at 122.124 kb on + strand at 122.124 kb on + strand at 122.124 kb on + strand at 122.130 kb on - strand at 122.132 kb on - strand at 122.132 kb on - strand at 122.132 kb on - strand at 122.146 kb on + strand at 122.156 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Benzethonium chloride 0.008 mM remove 119,272 - Dshi_0120 0.44 -0.4 119,314 + Dshi_0120 0.50 -2.7 119,395 - Dshi_0120 0.61 -0.4 119,397 + Dshi_0120 0.61 +0.7 119,483 - Dshi_0120 0.73 +0.2 119,625 + -1.0 119,692 - +0.6 119,772 + Dshi_0121 0.17 -0.2 119,842 + Dshi_0121 0.29 -0.3 119,960 - Dshi_0121 0.50 +0.2 120,103 + Dshi_0121 0.74 +1.1 120,371 + Dshi_0122 0.13 +0.8 120,378 + Dshi_0122 0.14 -2.3 120,386 - Dshi_0122 0.15 +1.2 120,389 + Dshi_0122 0.15 +0.6 120,456 + Dshi_0122 0.23 +1.0 120,669 - Dshi_0122 0.45 +0.6 120,669 - Dshi_0122 0.45 +1.2 120,705 - Dshi_0122 0.49 -0.6 120,705 - Dshi_0122 0.49 +1.5 120,777 + Dshi_0122 0.57 +0.7 120,785 - Dshi_0122 0.58 -0.6 120,815 - Dshi_0122 0.61 -1.8 120,835 + Dshi_0122 0.63 -0.3 120,843 + Dshi_0122 0.64 +1.4 120,845 - Dshi_0122 0.64 +0.7 120,851 - Dshi_0122 0.65 -2.3 120,877 - Dshi_0122 0.68 -1.2 120,945 - Dshi_0122 0.75 +0.8 121,004 - Dshi_0122 0.81 -0.1 121,062 + Dshi_0122 0.87 +0.7 121,167 + +0.0 121,180 - -1.0 121,180 - +0.2 121,187 - -1.6 121,250 + -1.7 121,304 + Dshi_0123 0.13 -2.8 121,307 - Dshi_0123 0.13 +0.7 121,325 + Dshi_0123 0.15 +0.8 121,326 - Dshi_0123 0.15 -0.2 121,416 - Dshi_0123 0.25 -1.1 121,440 + Dshi_0123 0.28 -0.2 121,487 - Dshi_0123 0.33 +0.9 121,538 - Dshi_0123 0.39 -1.3 121,553 - Dshi_0123 0.40 -1.2 121,588 - Dshi_0123 0.44 -0.0 121,655 - Dshi_0123 0.52 -0.0 121,662 + Dshi_0123 0.52 +0.9 121,701 + Dshi_0123 0.57 -0.2 121,711 + Dshi_0123 0.58 -2.2 121,716 + Dshi_0123 0.58 +0.4 121,777 + Dshi_0123 0.65 -0.5 121,849 - Dshi_0123 0.73 -2.3 121,849 - Dshi_0123 0.73 +0.8 121,856 - Dshi_0123 0.74 -0.2 121,915 - Dshi_0123 0.80 +0.3 121,974 + Dshi_0123 0.87 +1.4 122,049 + -0.2 122,058 + +0.2 122,102 + -0.1 122,103 + +0.3 122,103 + -1.0 122,109 - +0.4 122,112 + -1.6 122,124 + -0.3 122,124 + -1.6 122,124 + -0.0 122,130 - +0.1 122,132 - +0.0 122,132 - -3.0 122,132 - -0.3 122,146 + +0.2 122,156 + +0.9
Or see this region's nucleotide sequence