Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2956
Experiment: MoYLS4 with Rifampicin 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Rifampicin 0.1 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,727,562 | - | -4.6 | |||
3,727,594 | + | -5.2 | |||
3,727,940 | - | DvMF_2955 | 0.34 | -6.5 | |
3,727,975 | - | DvMF_2955 | 0.38 | -5.8 | |
3,728,153 | + | DvMF_2955 | 0.62 | -4.9 | |
3,728,234 | - | DvMF_2955 | 0.73 | -3.5 | |
3,728,639 | - | DvMF_2956 | 0.14 | -3.1 | |
3,728,801 | - | DvMF_2956 | 0.27 | -5.9 | |
3,728,811 | - | DvMF_2956 | 0.28 | -6.8 | |
3,728,967 | - | DvMF_2956 | 0.40 | -3.7 | |
3,729,001 | - | DvMF_2956 | 0.42 | -6.6 | |
3,729,003 | - | DvMF_2956 | 0.43 | -3.6 | |
3,729,017 | - | DvMF_2956 | 0.44 | -6.1 | |
3,729,190 | + | DvMF_2956 | 0.57 | -5.0 | |
3,729,260 | + | DvMF_2956 | 0.62 | -4.7 | |
3,729,318 | - | DvMF_2956 | 0.67 | -6.6 | |
3,729,390 | - | DvMF_2956 | 0.73 | -5.7 | |
3,729,416 | + | DvMF_2956 | 0.75 | -0.8 | |
3,729,424 | - | DvMF_2956 | 0.75 | -4.6 | |
3,729,965 | - | -0.0 | |||
3,730,478 | + | DvMF_2957 | 0.37 | +0.2 |
Or see this region's nucleotide sequence