Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2374
Experiment: MoYLS4 with Rifampicin 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Rifampicin 0.1 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,997,938 | - | DvMF_2373 | 0.80 | -0.2 | |
2,997,986 | + | DvMF_2373 | 0.81 | -0.3 | |
2,998,109 | - | DvMF_2373 | 0.84 | -0.2 | |
2,998,195 | + | DvMF_2373 | 0.86 | -0.2 | |
2,998,429 | - | -0.2 | |||
2,998,528 | - | +0.1 | |||
2,998,667 | - | +0.4 | |||
2,998,788 | + | -0.4 | |||
2,998,850 | + | -0.5 | |||
2,999,096 | + | DvMF_2374 | 0.20 | +0.2 | |
2,999,205 | + | DvMF_2374 | 0.28 | -0.2 | |
2,999,207 | - | DvMF_2374 | 0.28 | -0.4 | |
2,999,213 | - | DvMF_2374 | 0.29 | -0.6 | |
2,999,593 | + | DvMF_2374 | 0.57 | -0.4 | |
2,999,599 | + | DvMF_2374 | 0.57 | -0.2 | |
2,999,680 | + | DvMF_2374 | 0.63 | -0.5 | |
2,999,699 | - | DvMF_2374 | 0.65 | -0.2 | |
2,999,699 | - | DvMF_2374 | 0.65 | -0.4 | |
2,999,863 | + | DvMF_2374 | 0.77 | -0.5 | |
2,999,956 | - | DvMF_2374 | 0.84 | -0.3 | |
2,999,987 | + | DvMF_2374 | 0.86 | -0.3 | |
3,000,689 | + | DvMF_2375 | 0.48 | -0.5 | |
3,000,702 | - | DvMF_2375 | 0.50 | -0.4 | |
3,000,872 | + | DvMF_2375 | 0.76 | -0.5 | |
3,000,913 | + | DvMF_2375 | 0.83 | -1.5 |
Or see this region's nucleotide sequence