Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2282
Experiment: MoYLS4 with Rifampicin 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Rifampicin 0.1 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 2,869,994 | - | -0.5 | |||
| 2,870,205 | - | -0.7 | |||
| 2,870,236 | + | -0.0 | |||
| 2,870,513 | - | -1.0 | |||
| 2,870,633 | - | +0.6 | |||
| 2,870,727 | + | DvMF_2282 | 0.14 | -0.7 | |
| 2,870,727 | + | DvMF_2282 | 0.14 | -0.4 | |
| 2,870,779 | - | DvMF_2282 | 0.19 | -0.3 | |
| 2,870,962 | - | DvMF_2282 | 0.37 | -0.2 | |
| 2,871,156 | + | DvMF_2282 | 0.57 | -0.4 | |
| 2,871,166 | + | DvMF_2282 | 0.58 | -2.7 | |
| 2,871,169 | - | DvMF_2282 | 0.58 | +0.1 | |
| 2,871,169 | - | DvMF_2282 | 0.58 | -0.7 | |
| 2,871,179 | - | DvMF_2282 | 0.59 | +0.5 | |
| 2,871,239 | + | DvMF_2282 | 0.65 | -0.1 | |
| 2,871,385 | - | DvMF_2282 | 0.80 | +0.6 | |
| 2,871,636 | + | -0.3 | |||
| 2,871,636 | + | -0.1 | |||
| 2,871,636 | + | -0.4 | |||
| 2,871,644 | - | -1.0 | |||
| 2,872,200 | + | DvMF_2283 | 0.69 | +0.8 | |
| 2,872,406 | + | -0.4 | |||
| 2,872,495 | - | -0.1 | |||
| 2,872,495 | - | -0.1 | |||
| 2,872,559 | + | -0.4 |
Or see this region's nucleotide sequence