Strain Fitness in Shewanella loihica PV-4 around Shew_3765

Experiment: 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 5 mM
4,482,475	-		Shew_3764	0.19	+0.1
4,482,589	-		Shew_3764	0.28	+0.8
4,482,621	+		Shew_3764	0.31	+0.0
4,482,739	-		Shew_3764	0.40	-0.5
4,482,790	+		Shew_3764	0.44	-0.4
4,482,983	-		Shew_3764	0.60	+3.9
4,483,128	+		Shew_3764	0.72	+0.5
4,483,281	+		Shew_3764	0.84	+0.1
4,483,287	+		Shew_3764	0.85	-1.1
4,483,316	+		Shew_3764	0.87	+0.0
4,483,414	-				-0.1
4,483,526	+				+0.1
4,483,718	+		Shew_3765	0.24	-0.1
4,483,766	+		Shew_3765	0.28	-1.2
4,483,774	-		Shew_3765	0.29	+0.1
4,483,774	-		Shew_3765	0.29	+0.1
4,483,774	-		Shew_3765	0.29	-0.6
4,483,774	-		Shew_3765	0.29	+0.6
4,483,774	-		Shew_3765	0.29	+0.0
4,483,784	-		Shew_3765	0.30	-0.6
4,484,050	-		Shew_3765	0.56	+0.0
4,484,318	-		Shew_3765	0.81	+0.1
4,484,329	+		Shew_3765	0.82	-0.0
4,484,869	-		Shew_3766	0.12	+0.2
4,484,893	-		Shew_3766	0.12	-2.5
4,485,172	-		Shew_3766	0.22	-0.1
4,485,189	+		Shew_3766	0.22	-0.0
4,485,438	-		Shew_3766	0.30	+3.6