Strain Fitness in Shewanella loihica PV-4 around Shew_3467

Experiment: 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 5 mM
4,149,555	-		Shew_3466	0.35	-0.7
4,149,764	+		Shew_3466	0.49	-0.1
4,149,947	+		Shew_3466	0.61	+0.1
4,149,996	+		Shew_3466	0.64	+0.4
4,150,035	-		Shew_3466	0.67	+0.1
4,150,108	-		Shew_3466	0.72	+0.1
4,150,266	+		Shew_3466	0.82	-0.3
4,150,495	-				+0.1
4,150,552	+				+0.6
4,150,618	+		Shew_3467	0.16	-0.1
4,150,741	-		Shew_3467	0.41	+0.1
4,150,884	+		Shew_3467	0.69	-0.9
4,150,939	-		Shew_3467	0.80	-0.8
4,151,194	+				-0.1
4,151,238	-				+0.2
4,151,238	-				-0.2
4,151,494	-		Shew_3468	0.17	-0.0
4,151,556	+		Shew_3468	0.22	+0.2
4,151,651	+		Shew_3468	0.29	-0.3
4,151,831	-		Shew_3468	0.42	-0.5