Strain Fitness in Shewanella loihica PV-4 around Shew_3274

Experiment: 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 5 mM
3,916,020	+				-0.5
3,916,050	-				-0.1
3,916,330	-		Shew_3273	0.29	+2.3
3,916,387	-		Shew_3273	0.42	+2.7
3,916,513	-		Shew_3273	0.71	+2.8
3,916,589	-		Shew_3273	0.89	+2.7
3,916,643	-				+3.0
3,916,979	+				-0.0
3,916,992	-				+0.2
3,917,055	+		Shew_3274	0.11	-0.2
3,917,229	+		Shew_3274	0.28	-0.7
3,917,237	-		Shew_3274	0.29	-0.2
3,917,943	-				-0.4
3,918,002	-				+0.1
3,918,143	-				+0.2
3,918,148	+				+0.2
3,918,238	-				-0.9
3,918,299	-		Shew_3275	0.12	-0.1
3,918,305	-		Shew_3275	0.13	-0.3
3,918,394	+		Shew_3275	0.32	+0.3
3,918,811	-				-0.2