Strain Fitness in Shewanella loihica PV-4 around Shew_3265

Experiment: 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 5 mM
3,902,919	-		Shew_3264	0.35	-0.3
3,902,954	-		Shew_3264	0.41	+1.0
3,903,076	-		Shew_3264	0.61	+0.0
3,903,221	+		Shew_3264	0.86	+0.2
3,903,421	-				-0.0
3,903,680	-				+2.0
3,903,788	+				-0.2
3,903,956	+		Shew_3265	0.39	-0.5
3,904,763	-	dipZ	Shew_3266	0.34	+1.2