Strain Fitness in Shewanella loihica PV-4 around Shew_2775

Experiment: 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 5 mM
3,279,852	+		Shew_2774	0.46	+1.5
3,280,078	-		Shew_2774	0.67	-0.1
3,280,111	-		Shew_2774	0.70	-0.3
3,280,542	-				-0.2
3,281,064	-		Shew_2775	0.30	+0.0
3,281,605	-		Shew_2775	0.69	-1.2
3,281,615	-		Shew_2775	0.70	+0.1
3,281,957	+				-0.3
3,282,185	-				-0.4
3,282,185	-				-0.5
3,282,194	+				-0.5
3,282,285	-		Shew_2776	0.14	+0.4
3,282,360	-		Shew_2776	0.21	+0.1
3,282,400	-		Shew_2776	0.24	+0.9
3,282,402	+		Shew_2776	0.24	-0.0
3,282,896	+		Shew_2776	0.70	-0.1
3,282,949	-		Shew_2776	0.75	-0.1