Strain Fitness in Shewanella loihica PV-4 around Shew_2639

Experiment: 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 5 mM
3,115,421	+		Shew_2639	0.64	+0.6
3,115,652	-				-0.6
3,115,713	+				+2.0
3,115,721	-				+0.0
3,115,882	+	purU	Shew_2640	0.28	+0.1
3,116,071	-	purU	Shew_2640	0.50	-0.5
3,116,127	-	purU	Shew_2640	0.57	-0.2
3,116,421	+				+0.1
3,116,421	+				+0.5
3,116,429	-				-0.5
3,116,440	+				+0.5
3,116,448	-				+0.6