Strain Fitness in Shewanella loihica PV-4 around Shew_2571

Experiment: 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 5 mM
3,028,737	-		Shew_2570	0.23	+1.1
3,028,761	-		Shew_2570	0.25	+0.9
3,028,765	+		Shew_2570	0.26	+0.8
3,028,787	+		Shew_2570	0.28	+0.6
3,028,861	-		Shew_2570	0.34	+0.7
3,029,217	+		Shew_2570	0.64	+0.9
3,029,605	+				+0.9
3,029,772	-				+1.8
3,030,097	+		Shew_2571	0.23	+1.7
3,030,170	-		Shew_2571	0.28	+2.0
3,030,279	-		Shew_2571	0.35	+3.1
3,030,297	+		Shew_2571	0.36	+2.0
3,030,413	+		Shew_2571	0.43	+2.6
3,030,616	-		Shew_2571	0.56	+2.2
3,031,040	-		Shew_2571	0.82	+1.6
3,031,249	-				+1.4
3,031,425	-				+1.8
3,031,542	+		Shew_2572	0.20	+3.9
3,031,857	+		Shew_2572	0.60	+4.5
3,032,292	+				+2.1
3,032,310	-				+2.7
3,032,310	-				+2.1