Strain Fitness in Shewanella loihica PV-4 around Shew_2482

Experiment: 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 5 mM
2,919,013	-		Shew_2481	0.53	+2.4
2,919,433	-		Shew_2481	0.87	+2.2
2,920,174	+		Shew_2482	0.15	-0.6
2,920,178	-		Shew_2482	0.15	-0.9
2,920,254	-		Shew_2482	0.18	+0.3
2,920,254	-		Shew_2482	0.18	+0.4
2,920,421	+		Shew_2482	0.25	-0.3
2,920,609	-		Shew_2482	0.33	+0.1
2,921,009	-		Shew_2482	0.50	-0.2
2,921,071	-		Shew_2482	0.52	+0.6
2,921,108	+		Shew_2482	0.54	+0.1
2,921,108	+		Shew_2482	0.54	-0.5
2,921,108	+		Shew_2482	0.54	+0.2
2,921,399	-		Shew_2482	0.66	-1.6
2,921,496	-		Shew_2482	0.70	-0.6
2,921,822	-		Shew_2482	0.84	-0.7
2,921,822	-		Shew_2482	0.84	-1.4
2,922,188	-				-0.1
2,922,363	+				+0.1
2,922,371	-				+0.6
2,922,668	-	dinG	Shew_2483	0.14	+2.1
2,922,951	-	dinG	Shew_2483	0.28	+0.2