Strain Fitness in Shewanella loihica PV-4 around Shew_2346

Experiment: 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 5 mM
2,739,772	-		Shew_2345	0.40	-0.1
2,739,881	+		Shew_2345	0.47	-0.2
2,739,982	+		Shew_2345	0.54	-0.5
2,739,990	-		Shew_2345	0.55	-0.1
2,740,174	+		Shew_2345	0.67	-0.1
2,740,401	+		Shew_2345	0.82	-0.5
2,740,401	+		Shew_2345	0.82	+0.6
2,740,460	-		Shew_2345	0.86	+0.0
2,740,473	+		Shew_2345	0.86	+0.1
2,740,473	+		Shew_2345	0.86	+0.2
2,740,499	+		Shew_2345	0.88	+0.3
2,740,731	+				-0.1
2,740,782	-				+0.3
2,740,830	-		Shew_2346	0.15	-1.8
2,740,855	+		Shew_2346	0.18	-0.5
2,741,077	-		Shew_2346	0.52	+0.9
2,741,082	-		Shew_2346	0.52	-1.0
2,741,634	-		Shew_2347	0.27	+0.7
2,741,640	+		Shew_2347	0.28	+0.4
2,742,078	-		Shew_2347	0.79	+1.6
2,742,252	+				-0.1
2,742,394	-				+0.7