Strain Fitness in Shewanella loihica PV-4 around Shew_2142

Experiment: 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 5 mM
2,487,891	-		Shew_2141	0.48	+0.8
2,488,239	-		Shew_2141	0.78	+0.7
2,488,347	-		Shew_2141	0.87	+0.1
2,488,489	-				+0.3
2,488,753	-				-0.3
2,488,860	+		Shew_2142	0.26	-0.4
2,489,364	+		Shew_2143	0.25	-0.9
2,489,511	-		Shew_2143	0.46	+0.7
2,489,659	-		Shew_2143	0.68	+0.5
2,490,124	-		Shew_2144	0.20	+0.5