Strain Fitness in Shewanella loihica PV-4 around Shew_1535

Experiment: 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 5 mM
1,762,874	+		Shew_1534	0.77	-0.0
1,762,897	-		Shew_1534	0.78	+0.3
1,763,261	-		Shew_1534	0.89	+0.6
1,763,670	+				-0.1
1,763,718	+				-0.2
1,764,012	+		Shew_1535	0.54	+0.2
1,764,158	+		Shew_1535	0.78	-0.5
1,764,213	+		Shew_1535	0.87	-1.3
1,764,503	-		Shew_1536	0.20	-0.0
1,764,805	+		Shew_1536	0.68	+0.1
1,764,813	-		Shew_1536	0.69	-0.2