Strain Fitness in Shewanella loihica PV-4 around Shew_1476

Experiment: 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 5 mM
1,700,825	+				-0.2
1,701,098	-		Shew_1475	0.20	+0.1
1,701,248	+		Shew_1475	0.42	-0.3
1,701,413	+		Shew_1475	0.66	+0.1
1,701,744	-				+0.1
1,701,933	-		Shew_1476	0.36	-0.0
1,702,007	-		Shew_1476	0.47	-1.9
1,702,203	+		Shew_1476	0.78	-0.1
1,702,743	+		Shew_1477	0.54	+0.2
1,702,941	-		Shew_1477	0.81	+0.4
1,703,045	-				+0.1
1,703,331	+		Shew_1478	0.21	+0.1